5 items (Stegastes partitus) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	atp5pb	ATP synthase peripheral stalk-membrane subunit b. (252 aa)
	atp5f1c	ATP synthase subunit gamma. (293 aa)
	LOC103354591	ATP synthase subunit beta; Produces ATP from ADP in the presence of a proton gradient across the membrane. (517 aa)
	LOC103357988	ATP synthase subunit alpha; Produces ATP from ADP in the presence of a proton gradient across the membrane. (551 aa)
	atp5f1d	ATP synthase F1 subunit delta. (160 aa)

Your Current Organism:

Stegastes partitus

NCBI taxonomy Id: 144197
Other names: S. partitus, bicolor damselfish

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structured XML interaction data, according to the 'PSI-MI' data standard

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

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a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
LOC103354591	LOC103357988	ENSSPAP00000012932	ENSSPAP00000019656	ATP synthase subunit beta; Produces ATP from ADP in the presence of a proton gradient across the membrane.	ATP synthase subunit alpha; Produces ATP from ADP in the presence of a proton gradient across the membrane.	0.998
LOC103354591	atp5f1c	ENSSPAP00000012932	ENSSPAP00000006165	ATP synthase subunit beta; Produces ATP from ADP in the presence of a proton gradient across the membrane.	ATP synthase subunit gamma.	0.999
LOC103354591	atp5f1d	ENSSPAP00000012932	ENSSPAP00000024386	ATP synthase subunit beta; Produces ATP from ADP in the presence of a proton gradient across the membrane.	ATP synthase F1 subunit delta.	0.998
LOC103354591	atp5pb	ENSSPAP00000012932	ENSSPAP00000005839	ATP synthase subunit beta; Produces ATP from ADP in the presence of a proton gradient across the membrane.	ATP synthase peripheral stalk-membrane subunit b.	0.998
LOC103357988	LOC103354591	ENSSPAP00000019656	ENSSPAP00000012932	ATP synthase subunit alpha; Produces ATP from ADP in the presence of a proton gradient across the membrane.	ATP synthase subunit beta; Produces ATP from ADP in the presence of a proton gradient across the membrane.	0.998
LOC103357988	atp5f1c	ENSSPAP00000019656	ENSSPAP00000006165	ATP synthase subunit alpha; Produces ATP from ADP in the presence of a proton gradient across the membrane.	ATP synthase subunit gamma.	0.999
LOC103357988	atp5f1d	ENSSPAP00000019656	ENSSPAP00000024386	ATP synthase subunit alpha; Produces ATP from ADP in the presence of a proton gradient across the membrane.	ATP synthase F1 subunit delta.	0.999
LOC103357988	atp5pb	ENSSPAP00000019656	ENSSPAP00000005839	ATP synthase subunit alpha; Produces ATP from ADP in the presence of a proton gradient across the membrane.	ATP synthase peripheral stalk-membrane subunit b.	0.999
atp5f1c	LOC103354591	ENSSPAP00000006165	ENSSPAP00000012932	ATP synthase subunit gamma.	ATP synthase subunit beta; Produces ATP from ADP in the presence of a proton gradient across the membrane.	0.999
atp5f1c	LOC103357988	ENSSPAP00000006165	ENSSPAP00000019656	ATP synthase subunit gamma.	ATP synthase subunit alpha; Produces ATP from ADP in the presence of a proton gradient across the membrane.	0.999
atp5f1c	atp5f1d	ENSSPAP00000006165	ENSSPAP00000024386	ATP synthase subunit gamma.	ATP synthase F1 subunit delta.	0.999
atp5f1c	atp5pb	ENSSPAP00000006165	ENSSPAP00000005839	ATP synthase subunit gamma.	ATP synthase peripheral stalk-membrane subunit b.	0.999
atp5f1d	LOC103354591	ENSSPAP00000024386	ENSSPAP00000012932	ATP synthase F1 subunit delta.	ATP synthase subunit beta; Produces ATP from ADP in the presence of a proton gradient across the membrane.	0.998
atp5f1d	LOC103357988	ENSSPAP00000024386	ENSSPAP00000019656	ATP synthase F1 subunit delta.	ATP synthase subunit alpha; Produces ATP from ADP in the presence of a proton gradient across the membrane.	0.999
atp5f1d	atp5f1c	ENSSPAP00000024386	ENSSPAP00000006165	ATP synthase F1 subunit delta.	ATP synthase subunit gamma.	0.999
atp5f1d	atp5pb	ENSSPAP00000024386	ENSSPAP00000005839	ATP synthase F1 subunit delta.	ATP synthase peripheral stalk-membrane subunit b.	0.999
atp5pb	LOC103354591	ENSSPAP00000005839	ENSSPAP00000012932	ATP synthase peripheral stalk-membrane subunit b.	ATP synthase subunit beta; Produces ATP from ADP in the presence of a proton gradient across the membrane.	0.998
atp5pb	LOC103357988	ENSSPAP00000005839	ENSSPAP00000019656	ATP synthase peripheral stalk-membrane subunit b.	ATP synthase subunit alpha; Produces ATP from ADP in the presence of a proton gradient across the membrane.	0.999
atp5pb	atp5f1c	ENSSPAP00000005839	ENSSPAP00000006165	ATP synthase peripheral stalk-membrane subunit b.	ATP synthase subunit gamma.	0.999
atp5pb	atp5f1d	ENSSPAP00000005839	ENSSPAP00000024386	ATP synthase peripheral stalk-membrane subunit b.	ATP synthase F1 subunit delta.	0.999