STRINGSTRING
yme1l1 yme1l1 stoml2 stoml2 LOC103361203 LOC103361203 LOC103357327 LOC103357327 LOC103361287 LOC103361287 LOC103357955 LOC103357955 LOC103365153 LOC103365153 spg7 spg7 phb phb afg3l2 afg3l2 LOC103354339 LOC103354339
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
yme1l1YME1-like 1a. (722 aa)
stoml2Stomatin (EPB72)-like 2. (356 aa)
LOC103361203Rhomboid domain-containing protein. (378 aa)
LOC103357327Prohibitin. (305 aa)
LOC103361287PHB domain-containing protein. (352 aa)
LOC103357955Si:dkey-82o10.4. (274 aa)
LOC103365153Presenilin associated, rhomboid-like a. (386 aa)
spg7SPG7 matrix AAA peptidase subunit, paraplegin. (806 aa)
phbProhibitin. (271 aa)
afg3l2AFG3-like AAA ATPase 2. (918 aa)
LOC103354339YME1-like 1b. (717 aa)
Your Current Organism:
Stegastes partitus
NCBI taxonomy Id: 144197
Other names: S. partitus, bicolor damselfish
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