(8 nodes) Mixed, incl. Neuron remodeling, and Protein FAM184A/B, N-terminal network (Stegastes partitus)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	fam184a	Family with sequence similarity 184 member A. (1015 aa)
	ENSSPAP00000003529	Laminin N-terminal domain-containing protein. (90 aa)
	ntn4	Netrin 4. (659 aa)
	LOC103358322	Uncharacterized protein. (637 aa)
	LOC103371173	AIG1-type G domain-containing protein. (432 aa)
	BBOF1	Basal body orientation factor 1. (461 aa)
	LOC103375511	Si:dkey-202e22.2. (558 aa)
	ENSSPAP00000030790	Cnn_1N domain-containing protein. (64 aa)

Your Current Organism:

Stegastes partitus

NCBI taxonomy Id: 144197
Other names: S. partitus, bicolor damselfish

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structured XML interaction data, according to the 'PSI-MI' data standard

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node degree of proteins in your network (given the current score cut-off)

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a flat-file format describing the coordinates and colors of nodes in the network

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... protein annotations:

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

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a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
BBOF1	ENSSPAP00000003529	ENSSPAP00000013295	ENSSPAP00000003529	Basal body orientation factor 1.	Laminin N-terminal domain-containing protein.	0.495
BBOF1	LOC103358322	ENSSPAP00000013295	ENSSPAP00000007045	Basal body orientation factor 1.	Uncharacterized protein.	0.495
BBOF1	LOC103375511	ENSSPAP00000013295	ENSSPAP00000021204	Basal body orientation factor 1.	Si:dkey-202e22.2.	0.495
BBOF1	ntn4	ENSSPAP00000013295	ENSSPAP00000004190	Basal body orientation factor 1.	Netrin 4.	0.495
ENSSPAP00000003529	BBOF1	ENSSPAP00000003529	ENSSPAP00000013295	Laminin N-terminal domain-containing protein.	Basal body orientation factor 1.	0.495
ENSSPAP00000003529	ENSSPAP00000030790	ENSSPAP00000003529	ENSSPAP00000030790	Laminin N-terminal domain-containing protein.	Cnn_1N domain-containing protein.	0.495
ENSSPAP00000003529	LOC103371173	ENSSPAP00000003529	ENSSPAP00000009357	Laminin N-terminal domain-containing protein.	AIG1-type G domain-containing protein.	0.495
ENSSPAP00000003529	fam184a	ENSSPAP00000003529	ENSSPAP00000001276	Laminin N-terminal domain-containing protein.	Family with sequence similarity 184 member A.	0.495
ENSSPAP00000030790	ENSSPAP00000003529	ENSSPAP00000030790	ENSSPAP00000003529	Cnn_1N domain-containing protein.	Laminin N-terminal domain-containing protein.	0.495
ENSSPAP00000030790	LOC103358322	ENSSPAP00000030790	ENSSPAP00000007045	Cnn_1N domain-containing protein.	Uncharacterized protein.	0.495
ENSSPAP00000030790	LOC103375511	ENSSPAP00000030790	ENSSPAP00000021204	Cnn_1N domain-containing protein.	Si:dkey-202e22.2.	0.495
ENSSPAP00000030790	ntn4	ENSSPAP00000030790	ENSSPAP00000004190	Cnn_1N domain-containing protein.	Netrin 4.	0.495
LOC103358322	BBOF1	ENSSPAP00000007045	ENSSPAP00000013295	Uncharacterized protein.	Basal body orientation factor 1.	0.495
LOC103358322	ENSSPAP00000030790	ENSSPAP00000007045	ENSSPAP00000030790	Uncharacterized protein.	Cnn_1N domain-containing protein.	0.495
LOC103358322	LOC103371173	ENSSPAP00000007045	ENSSPAP00000009357	Uncharacterized protein.	AIG1-type G domain-containing protein.	0.495
LOC103358322	fam184a	ENSSPAP00000007045	ENSSPAP00000001276	Uncharacterized protein.	Family with sequence similarity 184 member A.	0.495
LOC103371173	ENSSPAP00000003529	ENSSPAP00000009357	ENSSPAP00000003529	AIG1-type G domain-containing protein.	Laminin N-terminal domain-containing protein.	0.495
LOC103371173	LOC103358322	ENSSPAP00000009357	ENSSPAP00000007045	AIG1-type G domain-containing protein.	Uncharacterized protein.	0.495
LOC103371173	LOC103375511	ENSSPAP00000009357	ENSSPAP00000021204	AIG1-type G domain-containing protein.	Si:dkey-202e22.2.	0.495
LOC103371173	ntn4	ENSSPAP00000009357	ENSSPAP00000004190	AIG1-type G domain-containing protein.	Netrin 4.	0.495