38 items (Stegastes partitus) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	LOC103368824	Uncharacterized protein. (618 aa)
	LOC103354937	C-type lectin domain-containing protein. (222 aa)
	LOC103371092	C-type lectin domain-containing protein. (278 aa)
	tyrobp	Uncharacterized protein. (187 aa)
	LOC103367189	C-type lectin domain-containing protein. (463 aa)
	ENSSPAP00000004051	C-type lectin domain-containing protein. (180 aa)
	adgrg6	Adhesion G protein-coupled receptor G6; Belongs to the G-protein coupled receptor 2 family. (1247 aa)
	ENSSPAP00000006568	Protein kinase domain-containing protein. (140 aa)
	ENSSPAP00000008163	C-type lectin domain-containing protein. (127 aa)
	syk	Tyrosine-protein kinase. (617 aa)
	ENSSPAP00000010036	Fc fragment of IgE, high affinity I, receptor for; gamma polypeptide. (93 aa)
	ENSSPAP00000010681	SRCR domain-containing protein. (208 aa)
	ENSSPAP00000010691	Uncharacterized protein. (144 aa)
	ENSSPAP00000011602	Ig-like domain-containing protein. (186 aa)
	ENSSPAP00000011859	Uncharacterized protein. (308 aa)
	LOC103358158	C-type lectin domain-containing protein. (297 aa)
	LOC103358168	C-type lectin domain-containing protein. (307 aa)
	LOC103358956	C-type lectin domain-containing protein. (312 aa)
	ENSSPAP00000015571	C-type lectin domain-containing protein. (227 aa)
	LOC103375349	C-type lectin domain-containing protein. (263 aa)
	LOC103356831	C-type lectin domain-containing protein. (263 aa)
	LOC103360854	Mannose receptor, C type 1b. (1454 aa)
	ENSSPAP00000018758	Fibronectin type-II domain-containing protein. (72 aa)
	LOC103360856	Mannose receptor, C type 1b. (1429 aa)
	LOC103353611	Asialoglycoprotein receptor-like 1. (234 aa)
	LOC103364647	C-type lectin domain-containing protein. (215 aa)
	ENSSPAP00000021003	C-type lectin domain-containing protein. (175 aa)
	ENSSPAP00000021083	Si:ch73-263f13.1. (103 aa)
	ENSSPAP00000021455	C-type lectin domain-containing protein. (235 aa)
	ENSSPAP00000021469	C-type lectin domain-containing protein. (236 aa)
	ENSSPAP00000023572	SRCR domain-containing protein. (128 aa)
	ENSSPAP00000027987	Uncharacterized protein. (87 aa)
	ENSSPAP00000028424	Thyroglobulin type-1 domain-containing protein. (98 aa)
	clec2d	C-type lectin domain-containing protein. (232 aa)
	LOC103364285	C-type lectin domain-containing protein. (252 aa)
	ENSSPAP00000029561	C-type lectin domain-containing protein. (246 aa)
	LOC103368243	C-type lectin domain-containing protein. (206 aa)
	LOC103360385	C-type lectin domain-containing protein. (216 aa)

Your Current Organism:

Stegastes partitus

NCBI taxonomy Id: 144197
Other names: S. partitus, bicolor damselfish

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structured XML interaction data, according to the 'PSI-MI' data standard

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node degree of proteins in your network (given the current score cut-off)

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a flat-file format describing the coordinates and colors of nodes in the network

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MFA: multi-fasta format - containing the aminoacid sequences in the network

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

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a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
ENSSPAP00000004051	ENSSPAP00000006568	ENSSPAP00000004051	ENSSPAP00000006568	C-type lectin domain-containing protein.	Protein kinase domain-containing protein.	0.437
ENSSPAP00000004051	ENSSPAP00000010036	ENSSPAP00000004051	ENSSPAP00000010036	C-type lectin domain-containing protein.	Fc fragment of IgE, high affinity I, receptor for; gamma polypeptide.	0.520
ENSSPAP00000004051	ENSSPAP00000010681	ENSSPAP00000004051	ENSSPAP00000010681	C-type lectin domain-containing protein.	SRCR domain-containing protein.	0.421
ENSSPAP00000004051	ENSSPAP00000011859	ENSSPAP00000004051	ENSSPAP00000011859	C-type lectin domain-containing protein.	Uncharacterized protein.	0.421
ENSSPAP00000004051	ENSSPAP00000021083	ENSSPAP00000004051	ENSSPAP00000021083	C-type lectin domain-containing protein.	Si:ch73-263f13.1.	0.437
ENSSPAP00000004051	ENSSPAP00000023572	ENSSPAP00000004051	ENSSPAP00000023572	C-type lectin domain-containing protein.	SRCR domain-containing protein.	0.421
ENSSPAP00000004051	ENSSPAP00000027987	ENSSPAP00000004051	ENSSPAP00000027987	C-type lectin domain-containing protein.	Uncharacterized protein.	0.520
ENSSPAP00000004051	ENSSPAP00000028424	ENSSPAP00000004051	ENSSPAP00000028424	C-type lectin domain-containing protein.	Thyroglobulin type-1 domain-containing protein.	0.415
ENSSPAP00000004051	LOC103358168	ENSSPAP00000004051	ENSSPAP00000012647	C-type lectin domain-containing protein.	C-type lectin domain-containing protein.	0.447
ENSSPAP00000004051	LOC103358956	ENSSPAP00000004051	ENSSPAP00000012715	C-type lectin domain-containing protein.	C-type lectin domain-containing protein.	0.447
ENSSPAP00000004051	LOC103368824	ENSSPAP00000004051	ENSSPAP00000000144	C-type lectin domain-containing protein.	Uncharacterized protein.	0.539
ENSSPAP00000004051	clec2d	ENSSPAP00000004051	ENSSPAP00000028763	C-type lectin domain-containing protein.	C-type lectin domain-containing protein.	0.758
ENSSPAP00000004051	syk	ENSSPAP00000004051	ENSSPAP00000009404	C-type lectin domain-containing protein.	Tyrosine-protein kinase.	0.478
ENSSPAP00000004051	tyrobp	ENSSPAP00000004051	ENSSPAP00000002095	C-type lectin domain-containing protein.	Uncharacterized protein.	0.597
ENSSPAP00000006568	ENSSPAP00000004051	ENSSPAP00000006568	ENSSPAP00000004051	Protein kinase domain-containing protein.	C-type lectin domain-containing protein.	0.437
ENSSPAP00000006568	ENSSPAP00000008163	ENSSPAP00000006568	ENSSPAP00000008163	Protein kinase domain-containing protein.	C-type lectin domain-containing protein.	0.413
ENSSPAP00000006568	ENSSPAP00000010036	ENSSPAP00000006568	ENSSPAP00000010036	Protein kinase domain-containing protein.	Fc fragment of IgE, high affinity I, receptor for; gamma polypeptide.	0.452
ENSSPAP00000006568	ENSSPAP00000015571	ENSSPAP00000006568	ENSSPAP00000015571	Protein kinase domain-containing protein.	C-type lectin domain-containing protein.	0.437
ENSSPAP00000006568	ENSSPAP00000018758	ENSSPAP00000006568	ENSSPAP00000018758	Protein kinase domain-containing protein.	Fibronectin type-II domain-containing protein.	0.437
ENSSPAP00000006568	ENSSPAP00000021003	ENSSPAP00000006568	ENSSPAP00000021003	Protein kinase domain-containing protein.	C-type lectin domain-containing protein.	0.437