10 items (Stegastes partitus) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	lgr4	Leucine-rich repeat containing G protein-coupled receptor 4. (913 aa)
	ENSSPAP00000010755	Uncharacterized protein. (221 aa)
	LGR5	Leucine rich repeat containing G protein-coupled receptor 5. (784 aa)
	ENSSPAP00000018651	Uncharacterized protein. (258 aa)
	rspo2	R-spondin 2. (286 aa)
	znrf3	Zinc and ring finger 3. (896 aa)
	rspo1	R-spondin 1. (302 aa)
	RNF43	Ring finger protein 43. (773 aa)
	LOC103353817	R-spondin 3. (340 aa)
	LGR6	Leucine rich repeat containing G protein-coupled receptor 6. (937 aa)

Your Current Organism:

Stegastes partitus

NCBI taxonomy Id: 144197
Other names: S. partitus, bicolor damselfish

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structured XML interaction data, according to the 'PSI-MI' data standard

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a flat-file format describing the coordinates and colors of nodes in the network

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

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a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
ENSSPAP00000010755	LGR5	ENSSPAP00000010755	ENSSPAP00000017193	Uncharacterized protein.	Leucine rich repeat containing G protein-coupled receptor 5.	0.883
ENSSPAP00000010755	LGR6	ENSSPAP00000010755	ENSSPAP00000031356	Uncharacterized protein.	Leucine rich repeat containing G protein-coupled receptor 6.	0.911
ENSSPAP00000010755	LOC103353817	ENSSPAP00000010755	ENSSPAP00000028891	Uncharacterized protein.	R-spondin 3.	0.833
ENSSPAP00000010755	RNF43	ENSSPAP00000010755	ENSSPAP00000023719	Uncharacterized protein.	Ring finger protein 43.	0.909
ENSSPAP00000010755	lgr4	ENSSPAP00000010755	ENSSPAP00000003769	Uncharacterized protein.	Leucine-rich repeat containing G protein-coupled receptor 4.	0.911
ENSSPAP00000010755	rspo1	ENSSPAP00000010755	ENSSPAP00000023080	Uncharacterized protein.	R-spondin 1.	0.824
ENSSPAP00000010755	rspo2	ENSSPAP00000010755	ENSSPAP00000019962	Uncharacterized protein.	R-spondin 2.	0.686
ENSSPAP00000010755	znrf3	ENSSPAP00000010755	ENSSPAP00000021717	Uncharacterized protein.	Zinc and ring finger 3.	0.911
ENSSPAP00000018651	LGR5	ENSSPAP00000018651	ENSSPAP00000017193	Uncharacterized protein.	Leucine rich repeat containing G protein-coupled receptor 5.	0.883
ENSSPAP00000018651	LGR6	ENSSPAP00000018651	ENSSPAP00000031356	Uncharacterized protein.	Leucine rich repeat containing G protein-coupled receptor 6.	0.911
ENSSPAP00000018651	LOC103353817	ENSSPAP00000018651	ENSSPAP00000028891	Uncharacterized protein.	R-spondin 3.	0.835
ENSSPAP00000018651	RNF43	ENSSPAP00000018651	ENSSPAP00000023719	Uncharacterized protein.	Ring finger protein 43.	0.909
ENSSPAP00000018651	lgr4	ENSSPAP00000018651	ENSSPAP00000003769	Uncharacterized protein.	Leucine-rich repeat containing G protein-coupled receptor 4.	0.911
ENSSPAP00000018651	rspo1	ENSSPAP00000018651	ENSSPAP00000023080	Uncharacterized protein.	R-spondin 1.	0.825
ENSSPAP00000018651	rspo2	ENSSPAP00000018651	ENSSPAP00000019962	Uncharacterized protein.	R-spondin 2.	0.690
ENSSPAP00000018651	znrf3	ENSSPAP00000018651	ENSSPAP00000021717	Uncharacterized protein.	Zinc and ring finger 3.	0.911
LGR5	ENSSPAP00000010755	ENSSPAP00000017193	ENSSPAP00000010755	Leucine rich repeat containing G protein-coupled receptor 5.	Uncharacterized protein.	0.883
LGR5	ENSSPAP00000018651	ENSSPAP00000017193	ENSSPAP00000018651	Leucine rich repeat containing G protein-coupled receptor 5.	Uncharacterized protein.	0.883
LGR5	LGR6	ENSSPAP00000017193	ENSSPAP00000031356	Leucine rich repeat containing G protein-coupled receptor 5.	Leucine rich repeat containing G protein-coupled receptor 6.	0.857
LGR5	LOC103353817	ENSSPAP00000017193	ENSSPAP00000028891	Leucine rich repeat containing G protein-coupled receptor 5.	R-spondin 3.	0.943