(22 nodes) Microtubule plus-end binding, and Mitotic cell cycle, embryonic network (Stegastes partitus)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	clasp2	Cytoplasmic linker associated protein 2. (1502 aa)
	trim36	Tripartite motif containing 36. (575 aa)
	ckap5	Cytoskeleton associated protein 5. (1852 aa)
	ENSSPAP00000005170	Uncharacterized protein. (339 aa)
	LOC103374758	Uncharacterized protein. (727 aa)
	tacc2	TACC_C domain-containing protein. (3581 aa)
	ENSSPAP00000015548	Uncharacterized protein. (348 aa)
	ENSSPAP00000015560	Uncharacterized protein. (116 aa)
	ENSSPAP00000016534	TACC_C domain-containing protein. (307 aa)
	clip2	CAP-GLY domain containing linker protein 2. (1014 aa)
	slain2	SLAIN motif family, member 2. (617 aa)
	LOC103361391	Microtubule-associated protein, RP/EB family, member 3a. (274 aa)
	mapre2	Microtubule-associated protein, RP/EB family, member 2. (338 aa)
	mapre3	Microtubule-associated protein, RP/EB family, member 3b. (273 aa)
	ENSSPAP00000022131	Uncharacterized protein. (206 aa)
	ENSSPAP00000026541	TOG domain-containing protein. (378 aa)
	ENSSPAP00000026555	Uncharacterized protein. (166 aa)
	ENSSPAP00000026564	Uncharacterized protein. (148 aa)
	mapre1	Microtubule-associated protein, RP/EB family, member 1b. (258 aa)
	clasp1	Cytoplasmic linker associated protein 1a. (1562 aa)
	ENSSPAP00000031354	Uncharacterized protein. (338 aa)
	ENSSPAP00000031355	Uncharacterized protein. (101 aa)

Your Current Organism:

Stegastes partitus

NCBI taxonomy Id: 144197
Other names: S. partitus, bicolor damselfish

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structured XML interaction data, according to the 'PSI-MI' data standard

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node degree of proteins in your network (given the current score cut-off)

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a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

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MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

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a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
ENSSPAP00000005170	LOC103361391	ENSSPAP00000005170	ENSSPAP00000019857	Uncharacterized protein.	Microtubule-associated protein, RP/EB family, member 3a.	0.617
ENSSPAP00000005170	LOC103374758	ENSSPAP00000005170	ENSSPAP00000014010	Uncharacterized protein.	Uncharacterized protein.	0.515
ENSSPAP00000005170	ckap5	ENSSPAP00000005170	ENSSPAP00000004209	Uncharacterized protein.	Cytoskeleton associated protein 5.	0.515
ENSSPAP00000005170	mapre1	ENSSPAP00000005170	ENSSPAP00000027873	Uncharacterized protein.	Microtubule-associated protein, RP/EB family, member 1b.	0.621
ENSSPAP00000005170	mapre2	ENSSPAP00000005170	ENSSPAP00000020878	Uncharacterized protein.	Microtubule-associated protein, RP/EB family, member 2.	0.617
ENSSPAP00000005170	mapre3	ENSSPAP00000005170	ENSSPAP00000021020	Uncharacterized protein.	Microtubule-associated protein, RP/EB family, member 3b.	0.617
ENSSPAP00000015548	ENSSPAP00000015560	ENSSPAP00000015548	ENSSPAP00000015560	Uncharacterized protein.	Uncharacterized protein.	0.899
ENSSPAP00000015548	ENSSPAP00000026541	ENSSPAP00000015548	ENSSPAP00000026541	Uncharacterized protein.	TOG domain-containing protein.	0.405
ENSSPAP00000015548	ENSSPAP00000026555	ENSSPAP00000015548	ENSSPAP00000026555	Uncharacterized protein.	Uncharacterized protein.	0.405
ENSSPAP00000015548	ENSSPAP00000031355	ENSSPAP00000015548	ENSSPAP00000031355	Uncharacterized protein.	Uncharacterized protein.	0.900
ENSSPAP00000015548	LOC103361391	ENSSPAP00000015548	ENSSPAP00000019857	Uncharacterized protein.	Microtubule-associated protein, RP/EB family, member 3a.	0.617
ENSSPAP00000015548	LOC103374758	ENSSPAP00000015548	ENSSPAP00000014010	Uncharacterized protein.	Uncharacterized protein.	0.515
ENSSPAP00000015548	ckap5	ENSSPAP00000015548	ENSSPAP00000004209	Uncharacterized protein.	Cytoskeleton associated protein 5.	0.515
ENSSPAP00000015548	clasp1	ENSSPAP00000015548	ENSSPAP00000031227	Uncharacterized protein.	Cytoplasmic linker associated protein 1a.	0.405
ENSSPAP00000015548	clasp2	ENSSPAP00000015548	ENSSPAP00000000488	Uncharacterized protein.	Cytoplasmic linker associated protein 2.	0.405
ENSSPAP00000015548	mapre1	ENSSPAP00000015548	ENSSPAP00000027873	Uncharacterized protein.	Microtubule-associated protein, RP/EB family, member 1b.	0.645
ENSSPAP00000015548	mapre2	ENSSPAP00000015548	ENSSPAP00000020878	Uncharacterized protein.	Microtubule-associated protein, RP/EB family, member 2.	0.617
ENSSPAP00000015548	mapre3	ENSSPAP00000015548	ENSSPAP00000021020	Uncharacterized protein.	Microtubule-associated protein, RP/EB family, member 3b.	0.617
ENSSPAP00000015560	ENSSPAP00000015548	ENSSPAP00000015560	ENSSPAP00000015548	Uncharacterized protein.	Uncharacterized protein.	0.899
ENSSPAP00000015560	ENSSPAP00000026541	ENSSPAP00000015560	ENSSPAP00000026541	Uncharacterized protein.	TOG domain-containing protein.	0.405