Your Input: | |
| | exosc5 | Exosome component 5. (220 aa) |
| | arsk | Tetratricopeptide repeat domain 37. (1582 aa) |
| | rc3h2 | Ring finger and CCCH-type domains 2. (1156 aa) |
| | exosc3 | Exosome component 3. (244 aa) |
| | mtpap | Mitochondrial poly(A) polymerase. (576 aa) |
| | patl2 | PAT1 homolog 2. (625 aa) |
| | ssb | Small RNA binding exonuclease protection factor La. (384 aa) |
| | ENSSPAP00000007455 | Uncharacterized protein. (144 aa) |
| | dcp1a | Decapping mRNA 1A. (506 aa) |
| | ENSSPAP00000008883 | Uncharacterized protein. (58 aa) |
| | cnot2 | CCR4-NOT transcription complex, subunit 2. (451 aa) |
| | LOC103363970 | Zgc:162730. (425 aa) |
| | LOC103363971 | Zgc:114130. (434 aa) |
| | exosc10 | Exosome component 10. (892 aa) |
| | LOC103366231 | Poly(A)-specific ribonuclease (deadenylation nuclease). (682 aa) |
| | samd4a | Sterile alpha motif domain containing 4A. (604 aa) |
| | cnot8 | CCR4-NOT transcription complex, subunit 8. (285 aa) |
| | mrto4 | Ribosome assembly factor mrt4; Component of the ribosome assembly machinery. Nuclear paralog of the ribosomal protein P0, it binds pre-60S subunits at an early stage of assembly in the nucleolus, and is replaced by P0 in cytoplasmic pre-60S subunits and mature 80S ribosomes. (240 aa) |
| | upf3a | UPF3A regulator of nonsense mediated mRNA decay. (477 aa) |
| | ENSSPAP00000010665 | Uncharacterized protein. (146 aa) |
| | ENSSPAP00000010685 | Uncharacterized protein. (143 aa) |
| | ENSSPAP00000010739 | Uncharacterized protein. (641 aa) |
| | magoh | Mago homolog, exon junction complex subunit. (147 aa) |
| | pelo | Protein pelota homolog; May function in recognizing stalled ribosomes and triggering endonucleolytic cleavage of the mRNA, a mechanism to release non- functional ribosomes and degrade damaged mRNAs. (385 aa) |
| | ENSSPAP00000011494 | Uncharacterized protein. (117 aa) |
| | smg7 | SMG7 nonsense mediated mRNA decay factor. (1122 aa) |
| | zfp36l2 | Zinc finger protein 36, C3H type-like 2. (430 aa) |
| | DXO | Decapping exoribonuclease. (426 aa) |
| | LOC103355155 | Uncharacterized protein. (562 aa) |
| | upf3b | UPF3B regulator of nonsense mediated mRNA decay. (457 aa) |
| | LOC103375937 | Enhancer of mRNA decapping 3 homolog (S. cerevisiae). (478 aa) |
| | zfp36l1 | Zinc finger protein 36, C3H type-like 1a. (372 aa) |
| | ENSSPAP00000013853 | Upf2 domain-containing protein. (252 aa) |
| | mettl16 | U6 small nuclear RNA (adenine-(43)-N(6))-methyltransferase; RNA N6-methyltransferase that methylates adenosine residues of a subset of RNAs and plays a key role in S-adenosyl-L-methionine homeostasis by regulating expression of MAT2A transcripts. Able to N6- methylate a subset of mRNAs and U6 small nuclear RNAs (U6 snRNAs). In contrast to the METTL3-METTL14 heterodimer, only able to methylate a limited number of RNAs: requires both a 5'UACAGAGAA-3' nonamer sequence and a specific RNA structure. In presence of S-adenosyl-L-methionine, binds the 3'-UTR region of MAT2A mRNA and specifical [...] (556 aa) |
| | LOC103375326 | Endo/exonuclease/phosphatase domain-containing protein. (367 aa) |
| | UPF1 | UPF1 RNA helicase and ATPase. (1100 aa) |
| | lsm4 | U6 snRNA-associated Sm-like protein LSm4; Binds specifically to the 3'-terminal U-tract of U6 snRNA. (151 aa) |
| | LOC103366853 | CCR4-NOT transcription complex, subunit 7. (248 aa) |
| | rbm8a | RNA-binding protein 8A; Core component of the splicing-dependent multiprotein exon junction complex (EJC) deposited at splice junctions on mRNAs. (175 aa) |
| | zc3h12a | Zinc finger CCCH-type containing 12A. (621 aa) |
| | NCBP1 | Nuclear cap binding protein subunit 1. (795 aa) |
| | supv3l1 | SUV3-like helicase. (758 aa) |
| | skiv2l | SKI2 homolog, superkiller viralicidic activity 2-like. (1188 aa) |
| | polr2d | Polymerase (RNA) II (DNA directed) polypeptide D. (144 aa) |
| | tbp | TATA box binding protein. (309 aa) |
| | mettl3 | Methyltransferase like 3; Belongs to the MT-A70-like family. (591 aa) |
| | LOC103361824 | Sb:cb81. (397 aa) |
| | LOC103366440 | NOT2_3_5 domain-containing protein. (536 aa) |
| | smg5 | SMG5 nonsense mediated mRNA decay factor. (1128 aa) |
| | ENSSPAP00000018995 | MIF4G domain-containing protein. (373 aa) |
| | nudt12 | Nudix (nucleoside diphosphate linked moiety X)-type motif 12. (459 aa) |
| | LOC103366045 | CCR4-NOT transcription complex, subunit 3b. (929 aa) |
| | exosc6 | Exosome component 6. (274 aa) |
| | swt1 | SWT1 RNA endoribonuclease homolog. (968 aa) |
| | smg1 | SMG1 nonsense mediated mRNA decay associated PI3K related kinase; Belongs to the PI3/PI4-kinase family. (3607 aa) |
| | cnot6 | CCR4-NOT transcription complex, subunit 6a. (559 aa) |
| | LOC103367511 | Uncharacterized protein. (1076 aa) |
| | nbas | Neuroblastoma amplified sequence. (1975 aa) |
| | mlh1 | MutL homolog 1, colon cancer, nonpolyposis type 2 (E. coli). (738 aa) |
| | samd4b | Sterile alpha motif domain containing 4B. (671 aa) |
| | ncbp2 | Nuclear cap-binding protein subunit 2; Component of the cap-binding complex (CBC), which binds co- transcriptionally to the 5' cap of pre-mRNAs and is involved in various processes such as pre-mRNA splicing, translation regulation, nonsense- mediated mRNA decay, RNA-mediated gene silencing (RNAi) by microRNAs (miRNAs) and mRNA export. The CBC complex is involved in mRNA export from the nucleus, leading to the recruitment of the mRNA export machinery to the 5' end of mRNA and to mRNA export in a 5' to 3' direction through the nuclear pore. The CBC complex is also involved in mediating U [...] (175 aa) |
| | rc3h1 | Ring finger and CCCH-type domains 1b. (1136 aa) |
| | cnot10 | CCR4-NOT transcription complex, subunit 10. (755 aa) |
| | pan3 | PAN2-PAN3 deadenylation complex subunit PAN3; Regulatory subunit of the poly(A)-nuclease (PAN) deadenylation complex, one of two cytoplasmic mRNA deadenylases involved in general and miRNA-mediated mRNA turnover. PAN specifically shortens poly(A) tails of RNA and the activity is stimulated by poly(A)-binding protein (PABP). PAN deadenylation is followed by rapid degradation of the shortened mRNA tails by the CCR4-NOT complex. Deadenylated mRNAs are then degraded by two alternative mechanisms, namely exosome-mediated 3'-5' exonucleolytic degradation, or deadenlyation-dependent mRNA deca [...] (793 aa) |
| | noct | Nocturnin. (465 aa) |
| | ENSSPAP00000019704 | Decapping mRNA 2. (248 aa) |
| | smg9 | SMG9 nonsense mediated mRNA decay factor. (508 aa) |
| | pde12 | Phosphodiesterase 12. (591 aa) |
| | RIDA | Reactive intermediate imine deaminase A homolog. (136 aa) |
| | lsm7 | LSM7 homolog, U6 small nuclear RNA and mRNA degradation associated. (167 aa) |
| | polr2g | Polymerase (RNA) II (DNA directed) polypeptide G-like. (171 aa) |
| | LOC103358589 | Uncharacterized protein. (491 aa) |
| | smg6 | SMG6 nonsense mediated mRNA decay factor. (1647 aa) |
| | LOC103360139 | Protein argonaute-3; Required for RNA-mediated gene silencing (RNAi). Binds to short RNAs such as microRNAs (miRNAs) and represses the translation of mRNAs which are complementary to them. Lacks endonuclease activity and does not appear to cleave target mRNAs; Belongs to the argonaute family. Ago subfamily. (876 aa) |
| | CNOT9 | CCR4-NOT transcription complex subunit 9. (299 aa) |
| | xrn2 | 5'-3' exoribonuclease; Possesses 5'->3' exoribonuclease activity. May promote termination of transcription by RNA polymerase II. (971 aa) |
| | LOC103374411 | Si:dkey-206d17.12. (601 aa) |
| | exosc4 | Exosome component 4. (264 aa) |
| | edc4 | Enhancer of mRNA decapping 4. (1390 aa) |
| | etf1 | Eukaryotic translation termination factor 1b. (443 aa) |
| | lsm2 | U6 snRNA-associated Sm-like protein LSm2; Binds specifically to the 3'-terminal U-tract of U6 snRNA. (95 aa) |
| | casc3 | Casc3 exon junction complex subunit. (766 aa) |
| | exosc2 | Exosome component 2. (293 aa) |
| | cnot6l | CCR4-NOT transcription complex, subunit 6-like. (553 aa) |
| | ENSSPAP00000030471 | Uncharacterized protein. (111 aa) |
| | smg8 | SMG8 nonsense mediated mRNA decay factor. (923 aa) |
| | PNPT1 | Polyribonucleotide nucleotidyltransferase 1. (770 aa) |
| | atm | Non-specific serine/threonine protein kinase. (3048 aa) |
| | eif4a3 | Eukaryotic translation initiation factor 4A3; Belongs to the DEAD box helicase family. (410 aa) |
| | ythdf2 | YTH N(6)-methyladenosine RNA binding protein 2. (638 aa) |
| | LOC103372505 | Tudor domain-containing protein. (183 aa) |
| | ENSSPAP00000024273 | C2H2-type domain-containing protein. (151 aa) |
| | ENSSPAP00000024293 | Uncharacterized protein. (148 aa) |
| | lrrc27 | Uncharacterized protein. (428 aa) |
| | snd1 | Staphylococcal nuclease and tudor domain containing 1. (641 aa) |
| | dis3l2 | DIS3-like exonuclease 2; 3'-5'-exoribonuclease that specifically recognizes RNAs polyuridylated at their 3' end and mediates their degradation. Component of an exosome-independent RNA degradation pathway that mediates degradation of both mRNAs and miRNAs that have been polyuridylated by a terminal uridylyltransferase. Essential for correct mitosis, and negatively regulates cell proliferation. Belongs to the RNR ribonuclease family. DIS3L2 subfamily. (1052 aa) |
| | ENSSPAP00000024373 | Uncharacterized protein. (701 aa) |
| | cnot1 | CCR4-NOT transcription complex, subunit 1. (2333 aa) |
| | CNOT7 | CCR4-NOT transcription complex subunit 7. (249 aa) |
| | LOC103367052 | Protein argonaute-3; Required for RNA-mediated gene silencing (RNAi). Binds to short RNAs such as microRNAs (miRNAs) and represses the translation of mRNAs which are complementary to them. Lacks endonuclease activity and does not appear to cleave target mRNAs; Belongs to the argonaute family. Ago subfamily. (867 aa) |
| | LOC103367053 | Argonaute RISC component 1; Belongs to the argonaute family. (858 aa) |
| | LOC103371553 | Reactive intermediate imine deaminase A homolog. (135 aa) |
| | ago2 | Protein argonaute-2; Required for RNA-mediated gene silencing (RNAi) by the RNA- induced silencing complex (RISC). The 'minimal RISC' appears to include ago2 bound to a short guide RNA such as a microRNA (miRNA) or short interfering RNA (siRNA). These guide RNAs direct RISC to complementary mRNAs that are targets for RISC-mediated gene silencing. The precise mechanism of gene silencing depends on the degree of complementarity between the miRNA or siRNA and its target. Binding of RISC to a perfectly complementary mRNA generally results in silencing due to endonucleolytic cleavage of the [...] (875 aa) |
| | pan2 | PAN2-PAN3 deadenylation complex catalytic subunit PAN2; Catalytic subunit of the poly(A)-nuclease (PAN) deadenylation complex, one of two cytoplasmic mRNA deadenylases involved in general and miRNA-mediated mRNA turnover. PAN specifically shortens poly(A) tails of RNA and the activity is stimulated by poly(A)-binding protein (PABP). PAN deadenylation is followed by rapid degradation of the shortened mRNA tails by the CCR4-NOT complex. Deadenylated mRNAs are then degraded by two alternative mechanisms, namely exosome-mediated 3'-5' exonucleolytic degradation, or deadenlyation-dependent [...] (1210 aa) |
| | pym1 | PYM homolog 1, exon junction complex associated factor. (214 aa) |
| | edc3 | Enhancer of mRNA decapping 3. (474 aa) |
| | pnrc2 | Proline-rich nuclear receptor coactivator 2. (159 aa) |
| | lsm1 | U6 snRNA-associated Sm-like protein LSm1; Probably involved with other LSm subunits in the general process of degradation of mRNAs. (133 aa) |
| | zcchc7 | Zinc finger, CCHC domain containing 7. (663 aa) |
| | exosc8 | Exosome component 8. (277 aa) |
| | LOC103363318 | CCR4-NOT transcription complex subunit 9. (297 aa) |
| | helz2 | C3H1-type domain-containing protein. (2910 aa) |
| | ctif | CBP80/20-dependent translation initiation factor. (584 aa) |
| | cnot3 | CCR4-NOT transcription complex, subunit 3a. (891 aa) |
| | LOC103368936 | Nanos homolog 2; Belongs to the nanos family. (155 aa) |
| | exosc9 | Exosome component 9. (420 aa) |
| | exosc7 | Exosome component 7. (291 aa) |
| | dcps | Decapping enzyme, scavenger. (330 aa) |
| | patl1 | PAT1 homolog 1, processing body mRNA decay factor. (752 aa) |
| | ENSSPAP00000004195 | LSM6 homolog, U6 small nuclear RNA and mRNA degradation associated. (80 aa) |
| | cnot11 | CCR4-NOT transcription complex, subunit 11. (445 aa) |
