STRINGSTRING
wdr45b wdr45b MAP1LC3B MAP1LC3B atg2a atg2a LOC103359516 LOC103359516 ENSSPAP00000009715 ENSSPAP00000009715 park7 park7 LOC103359525 LOC103359525 atp13a2 atp13a2 LOC103357286 LOC103357286 snap29 snap29 prkaa2 prkaa2 tm9sf1 tm9sf1 LOC103356239 LOC103356239 cln3 cln3 sec16b sec16b ENSSPAP00000011646 ENSSPAP00000011646 c9orf72 c9orf72 LOC103372311 LOC103372311 pik3c3 pik3c3 ufm1 ufm1 ubxn2a ubxn2a ENSSPAP00000012713 ENSSPAP00000012713 ENSSPAP00000012921 ENSSPAP00000012921 ATG2B ATG2B lamp2 lamp2 nsfl1c nsfl1c ogt ogt wdr81 wdr81 LOC103352978 LOC103352978 ulk2 ulk2 rab23 rab23 tmem130 tmem130 snx30 snx30 RAB39B RAB39B rab12 rab12 stx17 stx17 pjvk pjvk LOC103359881 LOC103359881 dram1 dram1 ZFYVE1 ZFYVE1 svip svip ENSSPAP00000030509 ENSSPAP00000030509 VPS4B VPS4B wdr45 wdr45 LOC103371557 LOC103371557 stbd1 stbd1 sting1 sting1 LOC103373258 LOC103373258 gba gba hdac10 hdac10 rb1cc1 rb1cc1 ei24 ei24 LOC103367659 LOC103367659 atg5 atg5 ENSSPAP00000028626 ENSSPAP00000028626 atg12 atg12 ENSSPAP00000028233 ENSSPAP00000028233 taz taz LOC103374416 LOC103374416 tollip tollip tmem39b tmem39b LOC103355426 LOC103355426 atg9a atg9a prkaa1 prkaa1 LOC103376178 LOC103376178 LOC103362993 LOC103362993 ulk3 ulk3 LOC103358740 LOC103358740 tmem41b tmem41b tmem59 tmem59 LOC103353774 LOC103353774 nod2 nod2 RAB19 RAB19 atg4c atg4c nod1 nod1 fbxl4 fbxl4 retreg2 retreg2 tigar tigar TEX264 TEX264 tmem208 tmem208 sqstm1 sqstm1 LIX1L LIX1L map1lc3c map1lc3c spns1 spns1 SNX14 SNX14 plaa plaa ENSSPAP00000025083 ENSSPAP00000025083 pink1 pink1 ENSSPAP00000024367 ENSSPAP00000024367 WIPI1 WIPI1 fundc1 fundc1 map1lc3a map1lc3a dram2 dram2 LOC103372511 LOC103372511 FUNDC1 FUNDC1 LOC103357444 LOC103357444 ufl1 ufl1 lrrk2 lrrk2 LOC103375385 LOC103375385 rnf185 rnf185 atg4d atg4d ENSSPAP00000017545 ENSSPAP00000017545 LOC103355198 LOC103355198 cisd2 cisd2 LOC103361823 LOC103361823 atg16l1 atg16l1 LOC103369702 LOC103369702 LOC103361834 LOC103361834 atg3 atg3 ddrgk1 ddrgk1 LOC103357413 LOC103357413 ubxn6 ubxn6 LOC103361836 LOC103361836 LOC103376073 LOC103376073 atg4a atg4a wdr24 wdr24 trappc4 trappc4 LOC103353121 LOC103353121 LOC103362481 LOC103362481 GABARAPL2 GABARAPL2 LOC103353645 LOC103353645 LOC103353141 LOC103353141 pik3r4 pik3r4 epg5 epg5 lix1 lix1 optn optn gabarap gabarap ulk1 ulk1 ENSSPAP00000019597 ENSSPAP00000019597 spata18 spata18 TMEM74 TMEM74 ENSSPAP00000020020 ENSSPAP00000020020 sec16a sec16a tmem39a tmem39a snx7 snx7 phf23 phf23 rab1a rab1a clec16a clec16a atg101 atg101 fnbp1l fnbp1l zfyve26 zfyve26 LOC103365098 LOC103365098 uvrag uvrag vti1b vti1b LOC103357327 LOC103357327 itgb4 itgb4 trappc8 trappc8 ENSSPAP00000015441 ENSSPAP00000015441 retreg3 retreg3 bag3 bag3 yod1 yod1 nrbf2 nrbf2 LOC103369404 LOC103369404 LOC103355702 LOC103355702 ENSSPAP00000001291 ENSSPAP00000001291 tp53inp2 tp53inp2 EVA1A EVA1A vps11 vps11 LOC103366613 LOC103366613 uba5 uba5 ambra1 ambra1 calcoco2 calcoco2 LOC103355517 LOC103355517 nbr1 nbr1 ripk2 ripk2 vps39 vps39 vps33a vps33a tp53inp1 tp53inp1 usp13 usp13 pacs2 pacs2 becn1 becn1 ENSSPAP00000003760 ENSSPAP00000003760 LOC103371715 LOC103371715 plekhm1 plekhm1 dap dap tbc1d5 tbc1d5 spg11 spg11 snapin snapin vps41 vps41 atg14 atg14 LOC103364964 LOC103364964 fbxo7 fbxo7 vps4a vps4a LOC103374601 LOC103374601 epm2a epm2a gabarapl2 gabarapl2 tgfbrap1 tgfbrap1 tmbim6 tmbim6 ILRUN ILRUN usp30 usp30 atg9b atg9b atg13 atg13 ENSSPAP00000007329 ENSSPAP00000007329 usp10 usp10 LOC103362565 LOC103362565 prkn prkn srpx srpx VMP1 VMP1 atg10 atg10 smcr8 smcr8 cltc cltc LOC103366194 LOC103366194 atg7 atg7 wipi2 wipi2 LOC103359003 LOC103359003
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
wdr45bWD repeat domain 45B. (344 aa)
MAP1LC3BMicrotubule-associated protein 1 light chain 3 beta. (137 aa)
atg2aAutophagy related 2A. (1803 aa)
LOC103359516BCAS3 microtubule associated cell migration factor. (711 aa)
ENSSPAP00000009715Reticulophagy regulator 1. (223 aa)
park7Parkinson protein 7. (189 aa)
LOC103359525Clathrin heavy chain; Clathrin is the major protein of the polyhedral coat of coated pits and vesicles; Belongs to the clathrin heavy chain family. (1686 aa)
atp13a2Cation-transporting ATPase; Belongs to the cation transport ATPase (P-type) (TC 3.A.3) family. Type V subfamily. (1187 aa)
LOC103357286Zinc finger, FYVE domain containing 1. (774 aa)
snap29Synaptosome associated protein 29. (257 aa)
prkaa2Non-specific serine/threonine protein kinase. (557 aa)
tm9sf1Transmembrane 9 superfamily member; Belongs to the nonaspanin (TM9SF) (TC 9.A.2) family. (609 aa)
LOC103356239Microtubule-associated protein 1 light chain 3 gamma, like. (212 aa)
cln3Battenin. (441 aa)
sec16bProtein transport protein sec16; Plays a role in the organization of the endoplasmic reticulum exit sites (ERES), also known as transitional endoplasmic reticulum (tER). Required for secretory cargo traffic from the endoplasmic reticulum to the Golgi apparatus. (920 aa)
ENSSPAP00000011646Ubiquitin-fold modifier conjugating enzyme 1. (137 aa)
c9orf72Zgc:100846. (462 aa)
LOC103372311Tectonin beta-propeller repeat containing 1a. (1145 aa)
pik3c3Phosphatidylinositol 3-kinase, catalytic subunit type 3; Belongs to the PI3/PI4-kinase family. (372 aa)
ufm1Ubiquitin-fold modifier 1. (78 aa)
ubxn2aUBX domain protein 2A. (250 aa)
ENSSPAP00000012713Rubicon like autophagy enhancer. (402 aa)
ENSSPAP00000012921WD repeat domain, phosphoinositide interacting 1. (295 aa)
ATG2BAutophagy related 2B. (2076 aa)
lamp2Lysosomal-associated membrane protein 2. (438 aa)
nsfl1cNSFL1 (p97) cofactor (p47). (373 aa)
ogtO-linked N-acetylglucosamine (GlcNAc) transferase, tandem duplicate 1. (1067 aa)
wdr81WD repeat domain 81. (2075 aa)
LOC103352978Prohibitin. (275 aa)
ulk2Unc-51 like autophagy activating kinase 2. (1026 aa)
rab23RAB23, member RAS oncogene family. (235 aa)
tmem130Transmembrane protein 130. (305 aa)
snx30Sorting nexin family member 30. (443 aa)
RAB39BRAB39B, member RAS oncogene family. (213 aa)
rab12RAB12, member RAS oncogene family. (243 aa)
stx17Syntaxin 17; Belongs to the syntaxin family. (296 aa)
pjvkPejvakin. (356 aa)
LOC103359881RAB7a, member RAS oncogene family. (207 aa)
dram1DNA-damage regulated autophagy modulator 1. (239 aa)
ZFYVE1Uncharacterized protein. (786 aa)
svipSi:ch73-147o17.1. (89 aa)
ENSSPAP00000030509Si:dkey-185p13.1. (93 aa)
VPS4BVacuolar protein sorting 4 homolog B; Belongs to the AAA ATPase family. (438 aa)
wdr45WD repeat domain 45. (358 aa)
LOC103371557Vesicle-associated membrane protein 8 (endobrevin). (123 aa)
stbd1CBM20 domain-containing protein. (1175 aa)
sting1Transmembrane protein 173. (408 aa)
LOC103373258ZRAB1B, member RAS oncogene family a. (204 aa)
gbaGlucosylceramidase. (411 aa)
hdac10Histone deacetylase 10. (674 aa)
rb1cc1RB1-inducible coiled-coil 1. (1617 aa)
ei24EI24 autophagy associated transmembrane protein. (340 aa)
LOC103367659Zgc:92606. (117 aa)
atg5Autophagy protein 5; Involved in autophagic vesicle formation. (264 aa)
ENSSPAP00000028626Uncharacterized protein. (151 aa)
atg12Ubiquitin-like protein ATG12; Ubiquitin-like protein involved in autophagic vesicle formation; Belongs to the ATG12 family. (117 aa)
ENSSPAP00000028233Uncharacterized protein. (420 aa)
tazTafazzin family protein; Belongs to the taffazin family. (310 aa)
LOC103374416Zgc:136908; Belongs to the AAA ATPase family. (807 aa)
tollipToll interacting protein. (275 aa)
tmem39bTransmembrane protein 39B. (488 aa)
LOC103355426ADP ribosylation factor like GTPase 8B; Belongs to the small GTPase superfamily. Arf family. (178 aa)
atg9aAutophagy-related protein 9; Involved in autophagy and cytoplasm to vacuole transport (Cvt) vesicle formation. Plays a key role in the organization of the preautophagosomal structure/phagophore assembly site (PAS), the nucleating site for formation of the sequestering vesicle. Belongs to the ATG9 family. (853 aa)
prkaa1Non-specific serine/threonine protein kinase. (573 aa)
LOC103376178Protein FAM134C-like. (499 aa)
LOC103362993Si:ch211-63o20.7; Belongs to the protein kinase superfamily. (398 aa)
ulk3Unc-51 like kinase 3; Belongs to the protein kinase superfamily. (469 aa)
LOC103358740Testis expressed 264, ER-phagy receptor a. (269 aa)
tmem41bTransmembrane protein 41B. (302 aa)
tmem59Transmembrane protein 59. (325 aa)
LOC103353774Si:ch211-266g18.9. (827 aa)
nod2Nucleotide-binding oligomerization domain containing 2. (989 aa)
RAB19RAB19, member RAS oncogene family. (232 aa)
atg4cCysteine protease; Cysteine protease required for the cytoplasm to vacuole transport (Cvt) and autophagy; Belongs to the peptidase C54 family. (496 aa)
nod1Nucleotide-binding oligomerization domain containing 1. (910 aa)
fbxl4F-box and leucine-rich repeat protein 4. (613 aa)
retreg2Reticulophagy regulator family member 2. (589 aa)
tigarTP53 induced glycolysis regulatory phosphatase b. (263 aa)
TEX264Testis expressed 264, ER-phagy receptor. (295 aa)
tmem208Transmembrane protein 208. (173 aa)
sqstm1Sequestosome 1. (415 aa)
LIX1LLimb and CNS expressed 1 like. (356 aa)
map1lc3cMicrotubule-associated protein 1 light chain 3 gamma. (128 aa)
spns1Spinster homolog 1 (Drosophila). (515 aa)
SNX14Sorting nexin 14. (935 aa)
plaaPhospholipase A2-activating protein. (798 aa)
ENSSPAP00000025083Vesicle transport through interaction with t-SNAREs 1A. (187 aa)
pink1PTEN induced kinase 1. (572 aa)
ENSSPAP00000024367C2 PI3K-type domain-containing protein; Belongs to the PI3/PI4-kinase family. (178 aa)
WIPI1WD repeat domain, phosphoinositide interacting 1. (443 aa)
fundc1Uncharacterized protein. (151 aa)
map1lc3aMicrotubule-associated protein 1 light chain 3 alpha. (121 aa)
dram2DNA-damage regulated autophagy modulator 2b. (264 aa)
LOC103372511G protein-coupled receptor 137Bb. (381 aa)
FUNDC1FUN14 domain containing 1. (158 aa)
LOC103357444Valosin containing protein; Belongs to the AAA ATPase family. (806 aa)
ufl1UFM1-specific ligase 1. (795 aa)
lrrk2Leucine-rich repeat kinase 2. (2421 aa)
LOC103375385Uncharacterized protein. (202 aa)
rnf185Ring finger protein 185. (193 aa)
atg4dCysteine protease; Cysteine protease required for the cytoplasm to vacuole transport (Cvt) and autophagy; Belongs to the peptidase C54 family. (499 aa)
ENSSPAP00000017545N_BRCA1_IG domain-containing protein. (628 aa)
LOC103355198Uncharacterized protein. (223 aa)
cisd2CDGSH iron sulfur domain 2. (135 aa)
LOC103361823Zgc:171927. (214 aa)
atg16l1ATG16 autophagy related 16-like 1 (S. cerevisiae). (507 aa)
LOC103369702Si:ch211-11n16.2. (610 aa)
LOC103361834WD_REPEATS_REGION domain-containing protein. (456 aa)
atg3Autophagy-related protein 3. (315 aa)
ddrgk1Uncharacterized protein. (298 aa)
LOC103357413Uncharacterized protein; Belongs to the AAA ATPase family. (435 aa)
ubxn6UBX domain protein 6. (439 aa)
LOC103361836Tectonin beta-propeller repeat containing 1b. (994 aa)
LOC103376073TP53 induced glycolysis regulatory phosphatase a. (269 aa)
atg4aCysteine protease; Cysteine protease required for the cytoplasm to vacuole transport (Cvt) and autophagy; Belongs to the peptidase C54 family. (394 aa)
wdr24WD repeat domain 24. (789 aa)
trappc4Trafficking protein particle complex subunit; Belongs to the TRAPP small subunits family. (219 aa)
LOC103353121Clathrin heavy chain; Clathrin is the major protein of the polyhedral coat of coated pits and vesicles; Belongs to the clathrin heavy chain family. (1684 aa)
LOC103362481ADP-ribosylation factor-like 8A; Belongs to the small GTPase superfamily. Arf family. (187 aa)
GABARAPL2GABA type A receptor associated protein like 2. (142 aa)
LOC103353645Unc-51 like autophagy activating kinase 1a. (899 aa)
LOC103353141Vacuole membrane protein 1. (405 aa)
pik3r4Phosphoinositide-3-kinase, regulatory subunit 4. (1343 aa)
epg5Ectopic P-granules autophagy protein 5 homolog (C. elegans). (2458 aa)
lix1Limb and CNS expressed 1. (318 aa)
optnOptineurin. (536 aa)
gabarapGABA(A) receptor-associated protein b. (122 aa)
ulk1Unc-51 like autophagy activating kinase 1. (1025 aa)
ENSSPAP00000019597Ring finger protein 213b. (3464 aa)
spata18Spermatogenesis associated 18. (480 aa)
TMEM74Transmembrane protein 74. (281 aa)
ENSSPAP00000020020Uncharacterized protein. (87 aa)
sec16aProtein transport protein sec16; Plays a role in the organization of the endoplasmic reticulum exit sites (ERES), also known as transitional endoplasmic reticulum (tER). Required for secretory cargo traffic from the endoplasmic reticulum to the Golgi apparatus. (2186 aa)
tmem39aTransmembrane protein 39A. (493 aa)
snx7Sorting nexin 7. (405 aa)
phf23PHD finger protein 23b. (317 aa)
rab1aUncharacterized protein. (228 aa)
clec16aC-type lectin domain containing 16A. (1113 aa)
atg101Autophagy related 101. (218 aa)
fnbp1lFormin binding protein 1-like. (567 aa)
zfyve26Zinc finger, FYVE domain containing 26. (2622 aa)
LOC103365098Smith-Magenis syndrome chromosome region, candidate 8b. (905 aa)
uvragUV radiation resistance associated gene. (673 aa)
vti1bVesicle transport through interaction with t-SNAREs 1B. (229 aa)
LOC103357327Prohibitin. (305 aa)
itgb4Integrin beta. (1992 aa)
trappc8Trafficking protein particle complex 8. (1473 aa)
ENSSPAP00000015441RING-type domain-containing protein. (77 aa)
retreg3Reticulophagy regulator family member 3. (499 aa)
bag3BCL2 associated athanogene 3. (552 aa)
yod1YOD1 deubiquitinase. (324 aa)
nrbf2Nuclear receptor binding factor 2b. (307 aa)
LOC103369404Uncharacterized protein. (935 aa)
LOC103355702Inflammation and lipid regulator with UBA-like and NBR1-like domains. (283 aa)
ENSSPAP00000001291Si:ch1073-143l10.2. (152 aa)
tp53inp2Uncharacterized protein. (285 aa)
EVA1AEva-1 homolog A, regulator of programmed cell death. (141 aa)
vps11Vacuolar protein sorting-associated protein 11 homolog; Plays a role in vesicle-mediated protein trafficking to lysosomal compartments including the endocytic membrane transport and autophagic pathways. Believed to act as a core component of the putative HOPS and CORVET endosomal tethering complexes. Belongs to the VPS11 family. (835 aa)
LOC103366613Uncharacterized protein. (207 aa)
uba5Ubiquitin-like modifier activating enzyme 5. (403 aa)
ambra1Autophagy/beclin-1 regulator 1b. (1200 aa)
calcoco2SKICH domain-containing protein. (602 aa)
LOC103355517Si:ch211-260e23.8. (141 aa)
nbr1NBR1 autophagy cargo receptor a. (1080 aa)
ripk2Receptor-interacting serine-threonine kinase 2. (582 aa)
vps39VPS39 subunit of HOPS complex. (875 aa)
vps33aVPS33A core subunit of CORVET and HOPS complexes; Belongs to the STXBP/unc-18/SEC1 family. (600 aa)
tp53inp1Tumor protein p53 inducible nuclear protein 1. (292 aa)
usp13Ubiquitin carboxyl-terminal hydrolase. (834 aa)
pacs2Phosphofurin acidic cluster sorting protein 2. (879 aa)
becn1Beclin 1, autophagy related. (447 aa)
ENSSPAP00000003760ER membrane protein complex subunit 6. (111 aa)
LOC103371715Zgc:112052. (141 aa)
plekhm1Pleckstrin homology domain containing, family M (with RUN domain) member 1. (1067 aa)
dapDeath-associated protein. (143 aa)
tbc1d5TBC1 domain family, member 5. (889 aa)
spg11SPG11 vesicle trafficking associated, spatacsin. (2405 aa)
snapinSNARE-associated protein Snapin; Component of the BLOC-1 complex, a complex that is required for normal biogenesis of lysosome-related organelles (LRO), such as platelet dense granules and melanosomes. In concert with the AP-3 complex, the BLOC-1 complex is required to target membrane protein cargos into vesicles assembled at cell bodies for delivery into neurites and nerve terminals. The BLOC-1 complex, in association with SNARE proteins, is also proposed to be involved in neurite extension. Plays a role in intracellular vesicle trafficking and synaptic vesicle recycling; Belongs to t [...] (129 aa)
vps41Vacuolar protein sorting-associated protein 41 homolog; Plays a role in vesicle-mediated protein trafficking to lysosomal compartments including the endocytic membrane transport pathways; Belongs to the VPS41 family. (854 aa)
atg14Autophagy related 14. (508 aa)
LOC103364964Cysteine protease; Cysteine protease required for the cytoplasm to vacuole transport (Cvt) and autophagy; Belongs to the peptidase C54 family. (462 aa)
fbxo7F-box protein 7. (467 aa)
vps4aVacuolar protein sorting 4 homolog A; Belongs to the AAA ATPase family. (436 aa)
LOC103374601RAB33B, member RAS oncogene family a. (240 aa)
epm2aEPM2A glucan phosphatase, laforin. (316 aa)
gabarapl2GABA(A) receptor-associated protein like 2. (140 aa)
tgfbrap1Transforming growth factor, beta receptor associated protein 1. (877 aa)
tmbim6Testis enhanced gene transcript (BAX inhibitor 1); Belongs to the BI1 family. (237 aa)
ILRUNInflammation and lipid regulator with UBA-like and NBR1-like domains. (290 aa)
usp30Ubiquitin carboxyl-terminal hydrolase. (503 aa)
atg9bAutophagy-related protein 9; Involved in autophagy and cytoplasm to vacuole transport (Cvt) vesicle formation. Plays a key role in the organization of the preautophagosomal structure/phagophore assembly site (PAS), the nucleating site for formation of the sequestering vesicle. Belongs to the ATG9 family. (809 aa)
atg13Autophagy-related protein 13; Belongs to the ATG13 family. Metazoan subfamily. (541 aa)
ENSSPAP00000007329Vacuolar protein sorting 16 homolog. (689 aa)
usp10Ubiquitin carboxyl-terminal hydrolase. (879 aa)
LOC103362565ADP-ribosylation factor-like 8Ba; Belongs to the small GTPase superfamily. Arf family. (186 aa)
prknRBR-type E3 ubiquitin transferase. (341 aa)
srpxSushi-repeat containing protein X-linked. (450 aa)
VMP1Vacuole membrane protein 1. (447 aa)
atg10Autophagy_act_C domain-containing protein. (242 aa)
smcr8Smith-Magenis syndrome chromosome region, candidate 8a. (849 aa)
cltcClathrin heavy chain; Clathrin is the major protein of the polyhedral coat of coated pits and vesicles; Belongs to the clathrin heavy chain family. (1685 aa)
LOC103366194Si:dkey-46a10.3. (277 aa)
atg7ATG7 autophagy related 7 homolog (S. cerevisiae). (691 aa)
wipi2WD repeat domain, phosphoinositide interacting 2. (427 aa)
LOC103359003V-SNARE coiled-coil homology domain-containing protein. (118 aa)
Your Current Organism:
Stegastes partitus
NCBI taxonomy Id: 144197
Other names: S. partitus, bicolor damselfish
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