(12 nodes) Multicellular organism aging network (Stegastes partitus)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	sec63	SEC63 homolog, protein translocation regulator. (747 aa)
	LOC103362426	Endothelin receptor type Ab. (313 aa)
	gna12	G protein subunit alpha 12. (385 aa)
	ENSSPAP00000012851	Uncharacterized protein. (127 aa)
	LOC103360700	Guanine nucleotide binding protein (G protein), alpha 13b. (414 aa)
	slc1a2	Solute carrier family 1 member 2b. (558 aa)
	ercc1	Excision repair cross-complementation group 1. (361 aa)
	LOC103368189	Amino acid transporter. (667 aa)
	LOC103366006	Amino acid transporter. (572 aa)
	LOC103362723	Ring finger protein 165b. (349 aa)
	ednra	Endothelin receptor type Aa; Belongs to the G-protein coupled receptor 1 family. (451 aa)
	LOC103352803	Uncharacterized protein. (377 aa)

Your Current Organism:

Stegastes partitus

NCBI taxonomy Id: 144197
Other names: S. partitus, bicolor damselfish

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structured XML interaction data, according to the 'PSI-MI' data standard

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node degree of proteins in your network (given the current score cut-off)

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a flat-file format describing the coordinates and colors of nodes in the network

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... protein annotations:

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

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a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
ENSSPAP00000012851	LOC103362426	ENSSPAP00000012851	ENSSPAP00000018883	Uncharacterized protein.	Endothelin receptor type Ab.	0.992
ENSSPAP00000012851	ednra	ENSSPAP00000012851	ENSSPAP00000004293	Uncharacterized protein.	Endothelin receptor type Aa; Belongs to the G-protein coupled receptor 1 family.	0.993
LOC103352803	LOC103360700	ENSSPAP00000003915	ENSSPAP00000011311	Uncharacterized protein.	Guanine nucleotide binding protein (G protein), alpha 13b.	0.898
LOC103352803	LOC103362426	ENSSPAP00000003915	ENSSPAP00000018883	Uncharacterized protein.	Endothelin receptor type Ab.	0.936
LOC103352803	ednra	ENSSPAP00000003915	ENSSPAP00000004293	Uncharacterized protein.	Endothelin receptor type Aa; Belongs to the G-protein coupled receptor 1 family.	0.936
LOC103352803	gna12	ENSSPAP00000003915	ENSSPAP00000017907	Uncharacterized protein.	G protein subunit alpha 12.	0.899
LOC103360700	LOC103352803	ENSSPAP00000011311	ENSSPAP00000003915	Guanine nucleotide binding protein (G protein), alpha 13b.	Uncharacterized protein.	0.898
LOC103360700	LOC103362426	ENSSPAP00000011311	ENSSPAP00000018883	Guanine nucleotide binding protein (G protein), alpha 13b.	Endothelin receptor type Ab.	0.936
LOC103360700	ednra	ENSSPAP00000011311	ENSSPAP00000004293	Guanine nucleotide binding protein (G protein), alpha 13b.	Endothelin receptor type Aa; Belongs to the G-protein coupled receptor 1 family.	0.936
LOC103360700	gna12	ENSSPAP00000011311	ENSSPAP00000017907	Guanine nucleotide binding protein (G protein), alpha 13b.	G protein subunit alpha 12.	0.899
LOC103362426	ENSSPAP00000012851	ENSSPAP00000018883	ENSSPAP00000012851	Endothelin receptor type Ab.	Uncharacterized protein.	0.992
LOC103362426	LOC103352803	ENSSPAP00000018883	ENSSPAP00000003915	Endothelin receptor type Ab.	Uncharacterized protein.	0.936
LOC103362426	LOC103360700	ENSSPAP00000018883	ENSSPAP00000011311	Endothelin receptor type Ab.	Guanine nucleotide binding protein (G protein), alpha 13b.	0.936
LOC103362426	ednra	ENSSPAP00000018883	ENSSPAP00000004293	Endothelin receptor type Ab.	Endothelin receptor type Aa; Belongs to the G-protein coupled receptor 1 family.	0.899
LOC103362426	gna12	ENSSPAP00000018883	ENSSPAP00000017907	Endothelin receptor type Ab.	G protein subunit alpha 12.	0.936
ednra	ENSSPAP00000012851	ENSSPAP00000004293	ENSSPAP00000012851	Endothelin receptor type Aa; Belongs to the G-protein coupled receptor 1 family.	Uncharacterized protein.	0.993
ednra	LOC103352803	ENSSPAP00000004293	ENSSPAP00000003915	Endothelin receptor type Aa; Belongs to the G-protein coupled receptor 1 family.	Uncharacterized protein.	0.936
ednra	LOC103360700	ENSSPAP00000004293	ENSSPAP00000011311	Endothelin receptor type Aa; Belongs to the G-protein coupled receptor 1 family.	Guanine nucleotide binding protein (G protein), alpha 13b.	0.936
ednra	LOC103362426	ENSSPAP00000004293	ENSSPAP00000018883	Endothelin receptor type Aa; Belongs to the G-protein coupled receptor 1 family.	Endothelin receptor type Ab.	0.899
ednra	gna12	ENSSPAP00000004293	ENSSPAP00000017907	Endothelin receptor type Aa; Belongs to the G-protein coupled receptor 1 family.	G protein subunit alpha 12.	0.936