(12 nodes) Protein kinase A signaling network (Stegastes partitus)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	ednra	Endothelin receptor type Aa; Belongs to the G-protein coupled receptor 1 family. (451 aa)
	rab13	Uncharacterized protein. (200 aa)
	prkaca	Protein kinase, cAMP-dependent, catalytic, alpha, genome duplicate b; Belongs to the protein kinase superfamily. (351 aa)
	mroh1	Maestro heat-like repeat family member 1. (1636 aa)
	LOC103368767	Uncharacterized protein. (1414 aa)
	LOC103364115	Uncharacterized protein; Belongs to the protein kinase superfamily. (351 aa)
	LOC103362426	Endothelin receptor type Ab. (313 aa)
	myom1	Myomesin 1b. (1416 aa)
	LOC103359051	Myomesin 2a. (1390 aa)
	ENSSPAP00000012851	Uncharacterized protein. (127 aa)
	prkacb	Uncharacterized protein; Belongs to the protein kinase superfamily. (380 aa)
	LOC103367163	Protein kinase, cAMP-dependent, catalytic, alpha, genome duplicate a; Belongs to the protein kinase superfamily. (378 aa)

Your Current Organism:

Stegastes partitus

NCBI taxonomy Id: 144197
Other names: S. partitus, bicolor damselfish

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structured XML interaction data, according to the 'PSI-MI' data standard

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node degree of proteins in your network (given the current score cut-off)

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a flat-file format describing the coordinates and colors of nodes in the network

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

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a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
ENSSPAP00000012851	LOC103362426	ENSSPAP00000012851	ENSSPAP00000018883	Uncharacterized protein.	Endothelin receptor type Ab.	0.992
ENSSPAP00000012851	ednra	ENSSPAP00000012851	ENSSPAP00000004293	Uncharacterized protein.	Endothelin receptor type Aa; Belongs to the G-protein coupled receptor 1 family.	0.993
LOC103362426	ENSSPAP00000012851	ENSSPAP00000018883	ENSSPAP00000012851	Endothelin receptor type Ab.	Uncharacterized protein.	0.992
LOC103362426	ednra	ENSSPAP00000018883	ENSSPAP00000004293	Endothelin receptor type Ab.	Endothelin receptor type Aa; Belongs to the G-protein coupled receptor 1 family.	0.899
LOC103364115	LOC103367163	ENSSPAP00000022083	ENSSPAP00000001620	Uncharacterized protein; Belongs to the protein kinase superfamily.	Protein kinase, cAMP-dependent, catalytic, alpha, genome duplicate a; Belongs to the protein kinase superfamily.	0.898
LOC103364115	prkaca	ENSSPAP00000022083	ENSSPAP00000027885	Uncharacterized protein; Belongs to the protein kinase superfamily.	Protein kinase, cAMP-dependent, catalytic, alpha, genome duplicate b; Belongs to the protein kinase superfamily.	0.898
LOC103364115	prkacb	ENSSPAP00000022083	ENSSPAP00000002247	Uncharacterized protein; Belongs to the protein kinase superfamily.	Uncharacterized protein; Belongs to the protein kinase superfamily.	0.898
LOC103364115	rab13	ENSSPAP00000022083	ENSSPAP00000029833	Uncharacterized protein; Belongs to the protein kinase superfamily.	Uncharacterized protein.	0.898
LOC103367163	LOC103364115	ENSSPAP00000001620	ENSSPAP00000022083	Protein kinase, cAMP-dependent, catalytic, alpha, genome duplicate a; Belongs to the protein kinase superfamily.	Uncharacterized protein; Belongs to the protein kinase superfamily.	0.898
LOC103367163	prkaca	ENSSPAP00000001620	ENSSPAP00000027885	Protein kinase, cAMP-dependent, catalytic, alpha, genome duplicate a; Belongs to the protein kinase superfamily.	Protein kinase, cAMP-dependent, catalytic, alpha, genome duplicate b; Belongs to the protein kinase superfamily.	0.898
LOC103367163	prkacb	ENSSPAP00000001620	ENSSPAP00000002247	Protein kinase, cAMP-dependent, catalytic, alpha, genome duplicate a; Belongs to the protein kinase superfamily.	Uncharacterized protein; Belongs to the protein kinase superfamily.	0.899
LOC103367163	rab13	ENSSPAP00000001620	ENSSPAP00000029833	Protein kinase, cAMP-dependent, catalytic, alpha, genome duplicate a; Belongs to the protein kinase superfamily.	Uncharacterized protein.	0.898
ednra	ENSSPAP00000012851	ENSSPAP00000004293	ENSSPAP00000012851	Endothelin receptor type Aa; Belongs to the G-protein coupled receptor 1 family.	Uncharacterized protein.	0.993
ednra	LOC103362426	ENSSPAP00000004293	ENSSPAP00000018883	Endothelin receptor type Aa; Belongs to the G-protein coupled receptor 1 family.	Endothelin receptor type Ab.	0.899
prkaca	LOC103364115	ENSSPAP00000027885	ENSSPAP00000022083	Protein kinase, cAMP-dependent, catalytic, alpha, genome duplicate b; Belongs to the protein kinase superfamily.	Uncharacterized protein; Belongs to the protein kinase superfamily.	0.898
prkaca	LOC103367163	ENSSPAP00000027885	ENSSPAP00000001620	Protein kinase, cAMP-dependent, catalytic, alpha, genome duplicate b; Belongs to the protein kinase superfamily.	Protein kinase, cAMP-dependent, catalytic, alpha, genome duplicate a; Belongs to the protein kinase superfamily.	0.898
prkaca	prkacb	ENSSPAP00000027885	ENSSPAP00000002247	Protein kinase, cAMP-dependent, catalytic, alpha, genome duplicate b; Belongs to the protein kinase superfamily.	Uncharacterized protein; Belongs to the protein kinase superfamily.	0.898
prkaca	rab13	ENSSPAP00000027885	ENSSPAP00000029833	Protein kinase, cAMP-dependent, catalytic, alpha, genome duplicate b; Belongs to the protein kinase superfamily.	Uncharacterized protein.	0.898
prkacb	LOC103364115	ENSSPAP00000002247	ENSSPAP00000022083	Uncharacterized protein; Belongs to the protein kinase superfamily.	Uncharacterized protein; Belongs to the protein kinase superfamily.	0.898
prkacb	LOC103367163	ENSSPAP00000002247	ENSSPAP00000001620	Uncharacterized protein; Belongs to the protein kinase superfamily.	Protein kinase, cAMP-dependent, catalytic, alpha, genome duplicate a; Belongs to the protein kinase superfamily.	0.899