(13 nodes) Aspartate transmembrane transport network (Stegastes partitus)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	LOC103370454	Solute carrier family 25 member 13; Belongs to the mitochondrial carrier (TC 2.A.29) family. (681 aa)
	LOC103362804	Uncharacterized protein; Belongs to the mitochondrial carrier (TC 2.A.29) family. (332 aa)
	SLC25A12	Solute carrier family 25 member 12; Belongs to the mitochondrial carrier (TC 2.A.29) family. (680 aa)
	slc25a18	Solute carrier family 25 member 18; Belongs to the mitochondrial carrier (TC 2.A.29) family. (328 aa)
	LOC103371866	Si:ch211-106h11.1. (852 aa)
	LOC103368774	Leucine rich repeat containing 8 VRAC subunit Db. (851 aa)
	lrrc8c	Leucine rich repeat containing 8 VRAC subunit C. (779 aa)
	slc25a22	Solute carrier family 25 member 22a; Belongs to the mitochondrial carrier (TC 2.A.29) family. (307 aa)
	LOC103371512	Solute carrier family 25 member 22a; Belongs to the mitochondrial carrier (TC 2.A.29) family. (312 aa)
	slc3a1	Solute carrier family 3 member 1. (692 aa)
	LOC103355795	Leucine rich repeat containing 8 VRAC subunit Da. (852 aa)
	LOC103372818	Solute carrier family 25 member 12; Belongs to the mitochondrial carrier (TC 2.A.29) family. (683 aa)
	LOC103356131	Solute carrier family 25 member 55a; Belongs to the mitochondrial carrier (TC 2.A.29) family. (332 aa)

Your Current Organism:

Stegastes partitus

NCBI taxonomy Id: 144197
Other names: S. partitus, bicolor damselfish

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structured XML interaction data, according to the 'PSI-MI' data standard

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a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
LOC103355795	lrrc8c	ENSSPAP00000001646	ENSSPAP00000012372	Leucine rich repeat containing 8 VRAC subunit Da.	Leucine rich repeat containing 8 VRAC subunit C.	0.675
LOC103368774	lrrc8c	ENSSPAP00000012359	ENSSPAP00000012372	Leucine rich repeat containing 8 VRAC subunit Db.	Leucine rich repeat containing 8 VRAC subunit C.	0.675
LOC103371866	lrrc8c	ENSSPAP00000012192	ENSSPAP00000012372	Si:ch211-106h11.1.	Leucine rich repeat containing 8 VRAC subunit C.	0.684
lrrc8c	LOC103355795	ENSSPAP00000012372	ENSSPAP00000001646	Leucine rich repeat containing 8 VRAC subunit C.	Leucine rich repeat containing 8 VRAC subunit Da.	0.675
lrrc8c	LOC103368774	ENSSPAP00000012372	ENSSPAP00000012359	Leucine rich repeat containing 8 VRAC subunit C.	Leucine rich repeat containing 8 VRAC subunit Db.	0.675
lrrc8c	LOC103371866	ENSSPAP00000012372	ENSSPAP00000012192	Leucine rich repeat containing 8 VRAC subunit C.	Si:ch211-106h11.1.	0.684