STRINGSTRING
tp53inp2 tp53inp2 ppargc1a ppargc1a ENSSPAP00000030409 ENSSPAP00000030409 nsmce2 nsmce2 ENSSPAP00000028233 ENSSPAP00000028233 LOC103366448 LOC103366448 LOC103366417 LOC103366417 daxx daxx sqstm1 sqstm1 rnf4 rnf4 LOC103364213 LOC103364213 nfe2 nfe2 LOC103365249 LOC103365249 rpain rpain klhl20 klhl20 ankrd1 ankrd1 LOC103366963 LOC103366963 ciita ciita rnf165 rnf165 tdp2 tdp2 blm blm ankrd2 ankrd2 usp7 usp7 atrx atrx LOC103369122 LOC103369122 smc6 smc6 RPA1 RPA1 rpa1 rpa1 LOC103370720 LOC103370720 LOC103366314 LOC103366314 casp8ap2 casp8ap2 trim8 trim8 chfr chfr ENSSPAP00000012348 ENSSPAP00000012348 n4bp1 n4bp1 rfwd3 rfwd3 topbp1 topbp1 rad51 rad51 rnf111 rnf111 smc5 smc5 morc3 morc3 LOC103353441 LOC103353441 sirt1 sirt1 mlip mlip top3a top3a ski ski rb1 rb1 patl2 patl2 patl1 patl1 mtor mtor atr atr ENSSPAP00000003306 ENSSPAP00000003306 tp53inp1 tp53inp1 topors topors
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
tp53inp2Uncharacterized protein. (285 aa)
ppargc1aPeroxisome proliferator-activated receptor gamma, coactivator 1 alpha. (1275 aa)
ENSSPAP00000030409Uncharacterized protein. (174 aa)
nsmce2NSE2 (MMS21) homolog, SMC5-SMC6 complex SUMO ligase. (230 aa)
ENSSPAP00000028233Uncharacterized protein. (420 aa)
LOC103366448Thymine DNA glycosylase, tandem duplicate 1. (454 aa)
LOC103366417Thymine DNA glycosylase, tandem duplicate 2. (399 aa)
daxxDeath-domain associated protein. (733 aa)
sqstm1Sequestosome 1. (415 aa)
rnf4Ring finger protein 4. (204 aa)
LOC103364213Structural maintenance of chromosomes 6. (896 aa)
nfe2Nuclear factor, erythroid 2. (504 aa)
LOC103365249RING-type domain-containing protein. (1123 aa)
rpainRPA interacting protein. (244 aa)
klhl20Kelch-like family member 20. (622 aa)
ankrd1Ankyrin repeat domain 1a (cardiac muscle). (302 aa)
LOC103366963Small ubiquitin-related modifier. (101 aa)
ciitaNACHT domain-containing protein. (1617 aa)
rnf165Ring finger protein 165a. (342 aa)
tdp2Tyrosyl-DNA phosphodiesterase 2b. (368 aa)
blmBLM RecQ like helicase. (1405 aa)
ankrd2Ankyrin repeat domain 2 (stretch responsive muscle). (284 aa)
usp7Ubiquitin specific peptidase 7 (herpes virus-associated); Belongs to the peptidase C19 family. (1112 aa)
atrxATRX chromatin remodeler. (2096 aa)
LOC103369122Ubiquitin-like domain-containing protein. (164 aa)
smc6Si:dkey-119f1.1. (1088 aa)
RPA1Replication protein A subunit; As part of the heterotrimeric replication protein A complex (RPA/RP-A), binds and stabilizes single-stranded DNA intermediates, that form during DNA replication or upon DNA stress. It prevents their reannealing and in parallel, recruits and activates different proteins and complexes involved in DNA metabolism. Thereby, it plays an essential role both in DNA replication and the cellular response to DNA damage. (597 aa)
rpa1Replication protein A subunit; As part of the heterotrimeric replication protein A complex (RPA/RP-A), binds and stabilizes single-stranded DNA intermediates, that form during DNA replication or upon DNA stress. It prevents their reannealing and in parallel, recruits and activates different proteins and complexes involved in DNA metabolism. Thereby, it plays an essential role both in DNA replication and the cellular response to DNA damage. (600 aa)
LOC103370720Germ cell nuclear acidic peptidase. (606 aa)
LOC103366314Uncharacterized protein. (1845 aa)
casp8ap2Uncharacterized protein. (1838 aa)
trim8Tripartite motif containing 8b. (595 aa)
chfrCheckpoint with forkhead and ring finger domains, E3 ubiquitin protein ligase. (642 aa)
ENSSPAP00000012348Zgc:152774. (314 aa)
n4bp1Nedd4 binding protein 1. (983 aa)
rfwd3Ring finger and WD repeat domain 3. (727 aa)
topbp1DNA topoisomerase II binding protein 1. (1518 aa)
rad51DNA repair protein RAD51 homolog; Plays an important role in homologous strand exchange, a key step in DNA repair through homologous recombination. Binds to single and double-stranded DNA and exhibits DNA-dependent ATPase activity. Catalyzes the recognition of homology and strand exchange between homologous DNA partners to form a joint molecule between a processed DNA break and the repair template. Binds to single-stranded DNA in an ATP-dependent manner to form nucleoprotein filaments which are essential for the homology search and strand exchange. Belongs to the RecA family. RAD51 sub [...] (338 aa)
rnf111Ring finger protein 111. (1027 aa)
smc5Structural maintenance of chromosomes 5. (1075 aa)
morc3MORC family CW-type zinc finger 3a. (1059 aa)
LOC103353441Si:ch73-29c22.1. (269 aa)
sirt1Deacetylase sirtuin-type domain-containing protein. (695 aa)
mlipUncharacterized protein. (874 aa)
top3aDNA topoisomerase; Introduces a single-strand break via transesterification at a target site in duplex DNA. Releases the supercoiling and torsional tension of DNA introduced during the DNA replication and transcription by transiently cleaving and rejoining one strand of the DNA duplex. The scissile phosphodiester is attacked by the catalytic tyrosine of the enzyme, resulting in the formation of a DNA-(5'-phosphotyrosyl)-enzyme intermediate and the expulsion of a 3'-OH DNA strand. Belongs to the type IA topoisomerase family. (1030 aa)
skiV-ski avian sarcoma viral oncogene homolog a. (746 aa)
rb1Retinoblastoma 1. (909 aa)
patl2PAT1 homolog 2. (625 aa)
patl1PAT1 homolog 1, processing body mRNA decay factor. (752 aa)
mtorSerine/threonine-protein kinase TOR; Belongs to the PI3/PI4-kinase family. (2514 aa)
atrATR serine/threonine kinase; Belongs to the PI3/PI4-kinase family. (2496 aa)
ENSSPAP00000003306RING-type domain-containing protein. (568 aa)
tp53inp1Tumor protein p53 inducible nuclear protein 1. (292 aa)
toporsTopoisomerase I binding, arginine/serine-rich a. (813 aa)
Your Current Organism:
Stegastes partitus
NCBI taxonomy Id: 144197
Other names: S. partitus, bicolor damselfish
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