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rsl1d1 rsl1d1 nop58 nop58 tsr1 tsr1 ngdn ngdn imp4 imp4 nop9 nop9 utp4 utp4 fbl fbl dcaf13 dcaf13 ENSSPAP00000026087 ENSSPAP00000026087 nol10 nol10 rrp9 rrp9 utp18 utp18 pes1 pes1 nop56 nop56 eif6 eif6 pdcd11 pdcd11 utp11 utp11 riok2 riok2 rrp15 rrp15 rrp7a rrp7a utp20 utp20 nsa2 nsa2 bop1 bop1 utp23 utp23 bysl bysl noc2l noc2l utp6 utp6 wdr46 wdr46 wdr36 wdr36 srfbp1 srfbp1 tbl3 tbl3 ltv1 ltv1 ENSSPAP00000013090 ENSSPAP00000013090 prkdc prkdc wdr74 wdr74 fcf1 fcf1 ENSSPAP00000011935 ENSSPAP00000011935 ENSSPAP00000011916 ENSSPAP00000011916 mrto4 mrto4 mphosph10 mphosph10 LOC103361127 LOC103361127 utp3 utp3 hunk hunk noc4l noc4l UTP14C UTP14C nol6 nol6 emg1 emg1 rrp1 rrp1 ebna1bp2 ebna1bp2 LOC103374053 LOC103374053 mak16 mak16 kri1 kri1 znf622 znf622 xrcc5 xrcc5 nop14 nop14 LOC103363326 LOC103363326 ftsj3 ftsj3 imp3 imp3 rpf1 rpf1 ENSSPAP00000000959 ENSSPAP00000000959 riok3 riok3 utp25 utp25 wdr3 wdr3 krr1 krr1 LOC103365965 LOC103365965 riok1 riok1 wdr12 wdr12
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
rsl1d1Ribosomal L1 domain containing 1. (375 aa)
nop58NOP58 ribonucleoprotein homolog (yeast). (530 aa)
tsr1TSR1 ribosome maturation factor. (837 aa)
ngdnNeuroguidin, EIF4E binding protein. (313 aa)
imp4IMP U3 small nucleolar ribonucleoprotein 4. (291 aa)
nop9Uncharacterized protein. (574 aa)
utp4UTP4 small subunit processome component. (658 aa)
fblFibrillarin. (315 aa)
dcaf13Ddb1 and cul4 associated factor 13. (445 aa)
ENSSPAP00000026087DUF663 domain-containing protein. (404 aa)
nol10Nucleolar protein 10. (717 aa)
rrp9Ribosomal RNA processing 9, U3 small nucleolar RNA binding protein. (478 aa)
utp18Uncharacterized protein. (559 aa)
pes1Pescadillo homolog; Component of the PeBoW complex, which is required for maturation of 28S and 5.8S ribosomal RNAs and formation of the 60S ribosome. (587 aa)
nop56NOP56 ribonucleoprotein homolog. (573 aa)
eif6Eukaryotic translation initiation factor 6; Binds to the 60S ribosomal subunit and prevents its association with the 40S ribosomal subunit to form the 80S initiation complex in the cytoplasm. May also be involved in ribosome biogenesis. (280 aa)
pdcd11Programmed cell death 11. (1756 aa)
utp11U3 small nucleolar RNA-associated protein 11; Involved in nucleolar processing of pre-18S ribosomal RNA. (253 aa)
riok2RIO kinase 2 (yeast). (550 aa)
rrp15Ribosomal RNA processing 15 homolog. (238 aa)
rrp7aRibosomal RNA processing 7 homolog A. (282 aa)
utp20UTP20 small subunit processome component. (2751 aa)
nsa2NSA2 ribosome biogenesis factor. (260 aa)
bop1Ribosome biogenesis protein BOP1; Component of the PeBoW complex, which is required for maturation of 28S and 5.8S ribosomal RNAs and formation of the 60S ribosome. (662 aa)
utp23UTP23 small subunit processome component. (249 aa)
byslBystin-like. (440 aa)
noc2lUncharacterized protein. (762 aa)
utp6UTP6 small subunit processome component. (600 aa)
wdr46WD repeat domain 46. (595 aa)
wdr36WD repeat domain 36. (885 aa)
srfbp1BUD22 domain-containing protein. (602 aa)
tbl3Transducin (beta)-like 3. (923 aa)
ltv1LTV1 ribosome biogenesis factor. (475 aa)
ENSSPAP00000013090Si:ch211-197l9.5. (298 aa)
prkdcProtein kinase, DNA-activated, catalytic subunit; Belongs to the PI3/PI4-kinase family. (3883 aa)
wdr74WD repeat domain 74. (387 aa)
fcf1FCF1 rRNA-processing protein. (186 aa)
ENSSPAP00000011935BP28CT domain-containing protein. (350 aa)
ENSSPAP00000011916Uncharacterized protein. (183 aa)
mrto4Ribosome assembly factor mrt4; Component of the ribosome assembly machinery. Nuclear paralog of the ribosomal protein P0, it binds pre-60S subunits at an early stage of assembly in the nucleolus, and is replaced by P0 in cytoplasmic pre-60S subunits and mature 80S ribosomes. (240 aa)
mphosph10U3 small nucleolar ribonucleoprotein protein MPP10; Component of the 60-80S U3 small nucleolar ribonucleoprotein (U3 snoRNP). Required for the early cleavages during pre-18S ribosomal RNA processing; Belongs to the MPP10 family. (714 aa)
LOC103361127Zona pellucida glycoprotein d. (400 aa)
utp3UTP3 small subunit processome component. (474 aa)
hunkHormonally up-regulated Neu-associated kinase. (686 aa)
noc4lNucleolar complex associated 4 homolog. (526 aa)
UTP14CUTP14C small subunit processome component. (754 aa)
nol6Nucleolar protein 6. (1141 aa)
emg1EMG1 N1-specific pseudouridine methyltransferase. (235 aa)
rrp1Uncharacterized protein. (974 aa)
ebna1bp2EBNA1 binding protein 2. (314 aa)
LOC103374053NSA2 ribosome biogenesis homolog (S. cerevisiae). (260 aa)
mak16Protein MAK16 homolog; Belongs to the MAK16 family. (302 aa)
kri1KRI1 homolog. (759 aa)
znf622Zinc finger protein 622. (472 aa)
xrcc5X-ray repair complementing defective repair in Chinese hamster cells 5. (769 aa)
nop14NOP14 nucleolar protein homolog (yeast). (874 aa)
LOC103363326Uncharacterized protein. (154 aa)
ftsj3pre-rRNA processing protein FTSJ3; Probable methyltransferase involved in the processing of the 34S pre-rRNA to 18S rRNA and in 40S ribosomal subunit formation. Belongs to the class I-like SAM-binding methyltransferase superfamily. RNA methyltransferase RlmE family. SPB1 subfamily. (859 aa)
imp3IMP U3 small nucleolar ribonucleoprotein 3. (183 aa)
rpf1Ribosome production factor 1 homolog. (210 aa)
ENSSPAP00000000959Bms1-type G domain-containing protein. (216 aa)
riok3Serine/threonine-protein kinase RIO3; Belongs to the protein kinase superfamily. RIO-type Ser/Thr kinase family. (510 aa)
utp25UTP25 small subunit processor component. (753 aa)
wdr3WD repeat domain 3. (769 aa)
krr1KRR1 small subunit processome component; Required for 40S ribosome biogenesis. Involved in nucleolar processing of pre-18S ribosomal RNA and ribosome assembly. (382 aa)
LOC103365965PWP2 small subunit processome component. (920 aa)
riok1Serine/threonine-protein kinase RIO1; Belongs to the protein kinase superfamily. RIO-type Ser/Thr kinase family. (530 aa)
wdr12Ribosome biogenesis protein WDR12; Component of the PeBoW complex, which is required for maturation of 28S and 5.8S ribosomal RNAs and formation of the 60S ribosome. (423 aa)
Your Current Organism:
Stegastes partitus
NCBI taxonomy Id: 144197
Other names: S. partitus, bicolor damselfish
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