STRINGSTRING
twnk twnk yme1l1 yme1l1 letm1 letm1 SPAST SPAST ugdh ugdh LOC103368774 LOC103368774 LOC103371866 LOC103371866 letm2 letm2 LOC103354339 LOC103354339 LOC103355795 LOC103355795
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
twnkTwinkle mtDNA helicase. (718 aa)
yme1l1YME1-like 1a. (722 aa)
letm1Leucine zipper-EF-hand containing transmembrane protein 1. (756 aa)
SPASTSpastin; Belongs to the AAA ATPase family. (477 aa)
ugdhUDP-glucose 6-dehydrogenase; Involved in the biosynthesis of glycosaminoglycans; hyaluronan, chondroitin sulfate, and heparan sulfate. Belongs to the UDP-glucose/GDP-mannose dehydrogenase family. (496 aa)
LOC103368774Leucine rich repeat containing 8 VRAC subunit Db. (851 aa)
LOC103371866Si:ch211-106h11.1. (852 aa)
letm2Leucine zipper-EF-hand containing transmembrane protein 2. (515 aa)
LOC103354339YME1-like 1b. (717 aa)
LOC103355795Leucine rich repeat containing 8 VRAC subunit Da. (852 aa)
Your Current Organism:
Stegastes partitus
NCBI taxonomy Id: 144197
Other names: S. partitus, bicolor damselfish
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