(11 nodes) Very-low-density lipoprotein particle network (Stegastes partitus)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	ENSSPAP00000030537	Vitellogenin domain-containing protein. (772 aa)
	LOC103368234	Uncharacterized protein. (364 aa)
	LOC103368235	Uncharacterized protein. (352 aa)
	LOC103371606	Apolipoprotein Ba. (4357 aa)
	apom	Uncharacterized protein. (190 aa)
	apoe	Apolipoprotein Eb. (303 aa)
	LOC103365212	Lipoprotein lipase; Key enzyme in triglyceride metabolism. Catalyzes the hydrolysis of triglycerides from circulating chylomicrons and very low density lipoproteins (VLDL), and thereby plays an important role in lipid clearance from the blood stream, lipid utilization and storage. Mediates margination of triglyceride-rich lipoprotein particles in capillaries. Recruited to its site of action on the luminal surface of vascular endothelium by binding to GPIHBP1 and cell surface heparan sulfate proteoglycans. (515 aa)
	LOC103365214	PLAT domain-containing protein. (509 aa)
	ENSSPAP00000030443	Vitellogenin domain-containing protein. (2395 aa)
	ENSSPAP00000030517	Vitellogenin domain-containing protein. (2328 aa)
	ENSSPAP00000030547	Uncharacterized protein. (414 aa)

Your Current Organism:

Stegastes partitus

NCBI taxonomy Id: 144197
Other names: S. partitus, bicolor damselfish

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
ENSSPAP00000030443	ENSSPAP00000030547	ENSSPAP00000030443	ENSSPAP00000030547	Vitellogenin domain-containing protein.	Uncharacterized protein.	0.464
ENSSPAP00000030443	LOC103368234	ENSSPAP00000030443	ENSSPAP00000030612	Vitellogenin domain-containing protein.	Uncharacterized protein.	0.676
ENSSPAP00000030443	LOC103368235	ENSSPAP00000030443	ENSSPAP00000030622	Vitellogenin domain-containing protein.	Uncharacterized protein.	0.676
ENSSPAP00000030443	apoe	ENSSPAP00000030443	ENSSPAP00000017611	Vitellogenin domain-containing protein.	Apolipoprotein Eb.	0.799
ENSSPAP00000030517	LOC103368234	ENSSPAP00000030517	ENSSPAP00000030612	Vitellogenin domain-containing protein.	Uncharacterized protein.	0.676
ENSSPAP00000030517	LOC103368235	ENSSPAP00000030517	ENSSPAP00000030622	Vitellogenin domain-containing protein.	Uncharacterized protein.	0.676
ENSSPAP00000030517	apoe	ENSSPAP00000030517	ENSSPAP00000017611	Vitellogenin domain-containing protein.	Apolipoprotein Eb.	0.799
ENSSPAP00000030537	ENSSPAP00000030547	ENSSPAP00000030537	ENSSPAP00000030547	Vitellogenin domain-containing protein.	Uncharacterized protein.	0.837
ENSSPAP00000030537	LOC103368234	ENSSPAP00000030537	ENSSPAP00000030612	Vitellogenin domain-containing protein.	Uncharacterized protein.	0.676
ENSSPAP00000030537	LOC103368235	ENSSPAP00000030537	ENSSPAP00000030622	Vitellogenin domain-containing protein.	Uncharacterized protein.	0.676
ENSSPAP00000030537	apoe	ENSSPAP00000030537	ENSSPAP00000017611	Vitellogenin domain-containing protein.	Apolipoprotein Eb.	0.799
ENSSPAP00000030547	ENSSPAP00000030443	ENSSPAP00000030547	ENSSPAP00000030443	Uncharacterized protein.	Vitellogenin domain-containing protein.	0.464
ENSSPAP00000030547	ENSSPAP00000030537	ENSSPAP00000030547	ENSSPAP00000030537	Uncharacterized protein.	Vitellogenin domain-containing protein.	0.837
ENSSPAP00000030547	LOC103368234	ENSSPAP00000030547	ENSSPAP00000030612	Uncharacterized protein.	Uncharacterized protein.	0.676
ENSSPAP00000030547	LOC103368235	ENSSPAP00000030547	ENSSPAP00000030622	Uncharacterized protein.	Uncharacterized protein.	0.676
ENSSPAP00000030547	apoe	ENSSPAP00000030547	ENSSPAP00000017611	Uncharacterized protein.	Apolipoprotein Eb.	0.799
LOC103365212	LOC103365214	ENSSPAP00000020935	ENSSPAP00000020963	Lipoprotein lipase; Key enzyme in triglyceride metabolism. Catalyzes the hydrolysis of triglycerides from circulating chylomicrons and very low density lipoproteins (VLDL), and thereby plays an important role in lipid clearance from the blood stream, lipid utilization and storage. Mediates margination of triglyceride-rich lipoprotein particles in capillaries. Recruited to its site of action on the luminal surface of vascular endothelium by binding to GPIHBP1 and cell surface heparan sulfate proteoglycans.	PLAT domain-containing protein.	0.901
LOC103365212	LOC103368234	ENSSPAP00000020935	ENSSPAP00000030612	Lipoprotein lipase; Key enzyme in triglyceride metabolism. Catalyzes the hydrolysis of triglycerides from circulating chylomicrons and very low density lipoproteins (VLDL), and thereby plays an important role in lipid clearance from the blood stream, lipid utilization and storage. Mediates margination of triglyceride-rich lipoprotein particles in capillaries. Recruited to its site of action on the luminal surface of vascular endothelium by binding to GPIHBP1 and cell surface heparan sulfate proteoglycans.	Uncharacterized protein.	0.723
LOC103365212	LOC103368235	ENSSPAP00000020935	ENSSPAP00000030622	Lipoprotein lipase; Key enzyme in triglyceride metabolism. Catalyzes the hydrolysis of triglycerides from circulating chylomicrons and very low density lipoproteins (VLDL), and thereby plays an important role in lipid clearance from the blood stream, lipid utilization and storage. Mediates margination of triglyceride-rich lipoprotein particles in capillaries. Recruited to its site of action on the luminal surface of vascular endothelium by binding to GPIHBP1 and cell surface heparan sulfate proteoglycans.	Uncharacterized protein.	0.723
LOC103365212	apoe	ENSSPAP00000020935	ENSSPAP00000017611	Lipoprotein lipase; Key enzyme in triglyceride metabolism. Catalyzes the hydrolysis of triglycerides from circulating chylomicrons and very low density lipoproteins (VLDL), and thereby plays an important role in lipid clearance from the blood stream, lipid utilization and storage. Mediates margination of triglyceride-rich lipoprotein particles in capillaries. Recruited to its site of action on the luminal surface of vascular endothelium by binding to GPIHBP1 and cell surface heparan sulfate proteoglycans.	Apolipoprotein Eb.	0.494