STRINGSTRING
nphs2 nphs2 podxl podxl LOC103354354 LOC103354354 smo smo GREM1 GREM1 LOC103373808 LOC103373808 ENSSPAP00000024464 ENSSPAP00000024464 ENSSPAP00000023760 ENSSPAP00000023760 pdgfb pdgfb LOC103362426 LOC103362426 nphs1 nphs1 LOC103358541 LOC103358541 prkci prkci magi2 magi2 LOC103366846 LOC103366846 basp1 basp1 fgf2 fgf2 LOC103375252 LOC103375252 LOC103352943 LOC103352943 kmo kmo thsd7a thsd7a tyro3 tyro3 ednra ednra LOC103358229 LOC103358229 LOC103364879 LOC103364879
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
nphs2NPHS2 stomatin family member, podocin. (375 aa)
podxlPodocalyxin-like. (473 aa)
LOC103354354Endothelin receptor Ba; Belongs to the G-protein coupled receptor 1 family. (419 aa)
smoSmoothened, frizzled class receptor; Belongs to the G-protein coupled receptor Fz/Smo family. (824 aa)
GREM1Gremlin; Belongs to the DAN family. (172 aa)
LOC103373808PDZ domain-containing protein. (143 aa)
ENSSPAP00000024464Odd-skipped related transcription factor 1. (249 aa)
ENSSPAP00000023760Uncharacterized protein. (205 aa)
pdgfbPDGF_2 domain-containing protein; Belongs to the PDGF/VEGF growth factor family. (569 aa)
LOC103362426Endothelin receptor type Ab. (313 aa)
nphs1NPHS1 adhesion molecule, nephrin. (1151 aa)
LOC103358541Platelet-derived growth factor beta polypeptide b; Belongs to the PDGF/VEGF growth factor family. (520 aa)
prkciProtein kinase C; Belongs to the protein kinase superfamily. AGC Ser/Thr protein kinase family. PKC subfamily. (588 aa)
magi2Membrane associated guanylate kinase, WW and PDZ domain containing 2a. (1262 aa)
LOC103366846G_PROTEIN_RECEP_F1_2 domain-containing protein; Belongs to the G-protein coupled receptor 1 family. (414 aa)
basp1Brain abundant, membrane attached signal protein 1. (219 aa)
fgf2Fibroblast growth factor; Belongs to the heparin-binding growth factors family. (155 aa)
LOC103375252Uncharacterized protein. (859 aa)
LOC103352943Endothelin receptor type Bb; Belongs to the G-protein coupled receptor 1 family. (436 aa)
kmoKynurenine 3-monooxygenase; Catalyzes the hydroxylation of L-kynurenine (L-Kyn) to form 3-hydroxy-L-kynurenine (L-3OHKyn). Required for synthesis of quinolinic acid. (471 aa)
thsd7aThrombospondin, type I, domain containing 7Aa. (1590 aa)
tyro3TYRO3 protein tyrosine kinase. (865 aa)
ednraEndothelin receptor type Aa; Belongs to the G-protein coupled receptor 1 family. (451 aa)
LOC103358229KN motif and ankyrin repeat domains 2. (1039 aa)
LOC103364879Coenzyme Q8B. (635 aa)
Your Current Organism:
Stegastes partitus
NCBI taxonomy Id: 144197
Other names: S. partitus, bicolor damselfish
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