(19 nodes) Post-anal tail morphogenesis network (Stegastes partitus)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	LOC103357570	Hairy-related 11. (262 aa)
	LOC103367097	Vang-like protein. (525 aa)
	LOC103362316	Metalloendopeptidase. (968 aa)
	LOC103363483	Mothers against decapentaplegic homolog. (476 aa)
	LOC103355473	Uncharacterized protein; Cadherins are calcium-dependent cell adhesion proteins. (918 aa)
	LOC103368849	T-box transcription factor Ta. (398 aa)
	CDH2	Cadherin 2; Cadherins are calcium-dependent cell adhesion proteins. (906 aa)
	ENSSPAP00000005561	Metalloendopeptidase. (997 aa)
	LOC103367232	Protein Wnt; Ligand for members of the frizzled family of seven transmembrane receptors; Belongs to the Wnt family. (378 aa)
	sp5	Sp5 transcription factor a. (375 aa)
	LOC103355704	Protein Wnt; Ligand for members of the frizzled family of seven transmembrane receptors; Belongs to the Wnt family. (353 aa)
	LOC103355705	Protein Wnt; Ligand for members of the frizzled family of seven transmembrane receptors; Belongs to the Wnt family. (340 aa)
	LOC103371952	Uncharacterized protein. (341 aa)
	LOC103369234	Vang-like protein. (526 aa)
	LOC103353638	Fibroblast growth factor receptor. (833 aa)
	tmed2	Transmembrane p24 trafficking protein 2. (207 aa)
	sfrp2	Secreted frizzled-related protein 2. (295 aa)
	bcl9l	Bcl9 like. (1541 aa)
	wnt5b	Protein Wnt; Ligand for members of the frizzled family of seven transmembrane receptors; Belongs to the Wnt family. (371 aa)

Your Current Organism:

Stegastes partitus

NCBI taxonomy Id: 144197
Other names: S. partitus, bicolor damselfish

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

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a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
CDH2	LOC103355473	ENSSPAP00000001222	ENSSPAP00000000369	Cadherin 2; Cadherins are calcium-dependent cell adhesion proteins.	Uncharacterized protein; Cadherins are calcium-dependent cell adhesion proteins.	0.899
LOC103355473	CDH2	ENSSPAP00000000369	ENSSPAP00000001222	Uncharacterized protein; Cadherins are calcium-dependent cell adhesion proteins.	Cadherin 2; Cadherins are calcium-dependent cell adhesion proteins.	0.899
LOC103355704	LOC103368849	ENSSPAP00000012022	ENSSPAP00000001221	Protein Wnt; Ligand for members of the frizzled family of seven transmembrane receptors; Belongs to the Wnt family.	T-box transcription factor Ta.	0.415
LOC103355704	LOC103371952	ENSSPAP00000012022	ENSSPAP00000026984	Protein Wnt; Ligand for members of the frizzled family of seven transmembrane receptors; Belongs to the Wnt family.	Uncharacterized protein.	0.875
LOC103355704	sfrp2	ENSSPAP00000012022	ENSSPAP00000015452	Protein Wnt; Ligand for members of the frizzled family of seven transmembrane receptors; Belongs to the Wnt family.	Secreted frizzled-related protein 2.	0.847
LOC103355705	LOC103368849	ENSSPAP00000012070	ENSSPAP00000001221	Protein Wnt; Ligand for members of the frizzled family of seven transmembrane receptors; Belongs to the Wnt family.	T-box transcription factor Ta.	0.415
LOC103355705	LOC103371952	ENSSPAP00000012070	ENSSPAP00000026984	Protein Wnt; Ligand for members of the frizzled family of seven transmembrane receptors; Belongs to the Wnt family.	Uncharacterized protein.	0.847
LOC103355705	sfrp2	ENSSPAP00000012070	ENSSPAP00000015452	Protein Wnt; Ligand for members of the frizzled family of seven transmembrane receptors; Belongs to the Wnt family.	Secreted frizzled-related protein 2.	0.847
LOC103363483	sp5	ENSSPAP00000014003	ENSSPAP00000007958	Mothers against decapentaplegic homolog.	Sp5 transcription factor a.	0.419
LOC103367097	LOC103367232	ENSSPAP00000028012	ENSSPAP00000005834	Vang-like protein.	Protein Wnt; Ligand for members of the frizzled family of seven transmembrane receptors; Belongs to the Wnt family.	0.518
LOC103367097	LOC103369234	ENSSPAP00000028012	ENSSPAP00000020873	Vang-like protein.	Vang-like protein.	0.898
LOC103367097	LOC103371952	ENSSPAP00000028012	ENSSPAP00000026984	Vang-like protein.	Uncharacterized protein.	0.579
LOC103367097	sfrp2	ENSSPAP00000028012	ENSSPAP00000015452	Vang-like protein.	Secreted frizzled-related protein 2.	0.579
LOC103367097	wnt5b	ENSSPAP00000028012	ENSSPAP00000030765	Vang-like protein.	Protein Wnt; Ligand for members of the frizzled family of seven transmembrane receptors; Belongs to the Wnt family.	0.518
LOC103367232	LOC103367097	ENSSPAP00000005834	ENSSPAP00000028012	Protein Wnt; Ligand for members of the frizzled family of seven transmembrane receptors; Belongs to the Wnt family.	Vang-like protein.	0.518
LOC103367232	LOC103369234	ENSSPAP00000005834	ENSSPAP00000020873	Protein Wnt; Ligand for members of the frizzled family of seven transmembrane receptors; Belongs to the Wnt family.	Vang-like protein.	0.518
LOC103367232	LOC103371952	ENSSPAP00000005834	ENSSPAP00000026984	Protein Wnt; Ligand for members of the frizzled family of seven transmembrane receptors; Belongs to the Wnt family.	Uncharacterized protein.	0.878
LOC103367232	sfrp2	ENSSPAP00000005834	ENSSPAP00000015452	Protein Wnt; Ligand for members of the frizzled family of seven transmembrane receptors; Belongs to the Wnt family.	Secreted frizzled-related protein 2.	0.878
LOC103367232	wnt5b	ENSSPAP00000005834	ENSSPAP00000030765	Protein Wnt; Ligand for members of the frizzled family of seven transmembrane receptors; Belongs to the Wnt family.	Protein Wnt; Ligand for members of the frizzled family of seven transmembrane receptors; Belongs to the Wnt family.	0.899
LOC103368849	LOC103355704	ENSSPAP00000001221	ENSSPAP00000012022	T-box transcription factor Ta.	Protein Wnt; Ligand for members of the frizzled family of seven transmembrane receptors; Belongs to the Wnt family.	0.415