STRINGSTRING
LOC103363273 LOC103363273 prepl prepl pheta1 pheta1 LOC103366729 LOC103366729 SNX2 SNX2 LOC103376583 LOC103376583 vps54 vps54 stx16 stx16 RAB29 RAB29 TMEM87A TMEM87A washc1 washc1 tbc1d5 tbc1d5 snx6 snx6 plekhj1 plekhj1 LOC103374049 LOC103374049 heatr5a heatr5a rab41 rab41 cltc cltc cln5 cln5 stx5 stx5 stx10 stx10 SLC66A2 SLC66A2 LOC103353460 LOC103353460 LOC103359525 LOC103359525 vps52 vps52 LOC103367340 LOC103367340 tbc1d10b tbc1d10b heatr5b heatr5b ENSSPAP00000010376 ENSSPAP00000010376 RAB9A RAB9A ENSSPAP00000010396 ENSSPAP00000010396 ENSSPAP00000010786 ENSSPAP00000010786 GOLT1B GOLT1B BET1L BET1L LOC103360106 LOC103360106 VAMP3 VAMP3 ENSSPAP00000012938 ENSSPAP00000012938 snx8 snx8 vti1b vti1b ENSSPAP00000014796 ENSSPAP00000014796 snx5 snx5 ENSSPAP00000014896 ENSSPAP00000014896 rbsn rbsn LOC103357891 LOC103357891 tbc1d10a tbc1d10a stx6 stx6 vps35 vps35 trappc10 trappc10 snx3 snx3 LOC103371972 LOC103371972 vps26a vps26a LOC103375420 LOC103375420 LOC103355838 LOC103355838 snx12 snx12 arfrp1 arfrp1 UBE2O UBE2O vps26b vps26b arl1 arl1 tbc1d10c tbc1d10c clcf1 clcf1 LOC103353121 LOC103353121 gbf1 gbf1 ENSSPAP00000022284 ENSSPAP00000022284 LOC103354239 LOC103354239 tbc1d23 tbc1d23 vps29 vps29 rgp1 rgp1 rnf126 rnf126 ENSSPAP00000024745 ENSSPAP00000024745 ENSSPAP00000024763 ENSSPAP00000024763 ENSSPAP00000025083 ENSSPAP00000025083 ankfy1 ankfy1 ENSSPAP00000025829 ENSSPAP00000025829 vps53 vps53 TMEM87B TMEM87B LOC103369927 LOC103369927 LOC103364794 LOC103364794 LOC103371536 LOC103371536 RIC1 RIC1 LOC103357602 LOC103357602 vps51 vps51
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
LOC103363273Uncharacterized protein. (208 aa)
preplProlyl endopeptidase like. (725 aa)
pheta1Si:ch211-193c2.2. (278 aa)
LOC103366729Sorting nexin 1a. (821 aa)
SNX2Sorting nexin 2. (299 aa)
LOC103376583Si:dkey-28n18.9. (369 aa)
vps54VPS54 subunit of GARP complex. (954 aa)
stx16Syntaxin 16; Belongs to the syntaxin family. (312 aa)
RAB29RAB29, member RAS oncogene family. (206 aa)
TMEM87ATransmembrane protein 87A. (550 aa)
washc1WAS protein family homolog 1. (474 aa)
tbc1d5TBC1 domain family, member 5. (889 aa)
snx6Sorting nexin; Involved in several stages of intracellular trafficking. (407 aa)
plekhj1Pleckstrin homology domain containing, family J member 1. (158 aa)
LOC103374049PH domain-containing protein. (274 aa)
heatr5aHEAT repeat containing 5a. (2005 aa)
rab41RAB41, member RAS oncogene family. (240 aa)
cltcClathrin heavy chain; Clathrin is the major protein of the polyhedral coat of coated pits and vesicles; Belongs to the clathrin heavy chain family. (1685 aa)
cln5CLN5 intracellular trafficking protein. (330 aa)
stx5Syntaxin 5A; Belongs to the syntaxin family. (329 aa)
stx10Syntaxin 10. (242 aa)
SLC66A2Solute carrier family 66 member 2. (271 aa)
LOC103353460Si:dkey-246g23.2. (244 aa)
LOC103359525Clathrin heavy chain; Clathrin is the major protein of the polyhedral coat of coated pits and vesicles; Belongs to the clathrin heavy chain family. (1686 aa)
vps52VPS52 subunit of GARP complex. (724 aa)
LOC103367340Zgc:153733. (262 aa)
tbc1d10bTBC1 domain family, member 10b. (928 aa)
heatr5bHEAT repeat containing 5B. (2047 aa)
ENSSPAP00000010376Uncharacterized protein. (140 aa)
RAB9ARAB9A, member RAS oncogene family. (206 aa)
ENSSPAP00000010396PIPK domain-containing protein. (259 aa)
ENSSPAP00000010786GRIP domain-containing protein. (424 aa)
GOLT1BGolgi transport 1Ba. (138 aa)
BET1LBet1 golgi vesicular membrane trafficking protein like. (109 aa)
LOC103360106RAB6B, member RAS oncogene family. (208 aa)
VAMP3Vesicle associated membrane protein 3. (104 aa)
ENSSPAP00000012938RAB9B, member RAS oncogene family. (219 aa)
snx8Sorting nexin 8a. (516 aa)
vti1bVesicle transport through interaction with t-SNAREs 1B. (229 aa)
ENSSPAP00000014796Golgi transport 1A. (121 aa)
snx5Sorting nexin; Involved in several stages of intracellular trafficking. (400 aa)
ENSSPAP00000014896Uncharacterized protein. (217 aa)
rbsnRabenosyn, RAB effector. (778 aa)
LOC103357891Uncharacterized protein. (334 aa)
tbc1d10aTBC1 domain family, member 10Aa. (511 aa)
stx6Syntaxin 6; Belongs to the syntaxin family. (262 aa)
vps35Vacuolar protein sorting-associated protein 35; Plays a role in vesicular protein sorting. (756 aa)
trappc10Trafficking protein particle complex 10. (1264 aa)
snx3Sorting nexin 3. (163 aa)
LOC103371972Golgi transport 1Bb. (138 aa)
vps26aVPS26, retromer complex component A. (328 aa)
LOC103375420Rab_bind domain-containing protein. (1521 aa)
LOC103355838CAP-ZIP_m domain-containing protein. (1467 aa)
snx12Sorting nexin 12. (182 aa)
arfrp1ADP-ribosylation factor related protein 1. (184 aa)
UBE2OUbiquitin conjugating enzyme E2 O. (1236 aa)
vps26bVPS26, retromer complex component B. (333 aa)
arl1ADP-ribosylation factor-like 1; Belongs to the small GTPase superfamily. Arf family. (181 aa)
tbc1d10cTBC1 domain family, member 10C. (1296 aa)
clcf1Cardiotrophin-like cytokine factor 1. (486 aa)
LOC103353121Clathrin heavy chain; Clathrin is the major protein of the polyhedral coat of coated pits and vesicles; Belongs to the clathrin heavy chain family. (1684 aa)
gbf1Golgi brefeldin A resistant guanine nucleotide exchange factor 1. (1870 aa)
ENSSPAP00000022284Sorting nexin 1b. (296 aa)
LOC103354239RAB6B, member RAS oncogene family a. (208 aa)
tbc1d23TBC1 domain family, member 23. (696 aa)
vps29Vacuolar protein sorting-associated protein 29; Acts as component of the retromer cargo-selective complex (CSC). The CSC is believed to be the core functional component of retromer or respective retromer complex variants acting to prevent missorting of selected transmembrane cargo proteins into the lysosomal degradation pathway. (208 aa)
rgp1GP1 homolog, RAB6A GEF complex partner 1. (395 aa)
rnf126RING-type domain-containing protein. (319 aa)
ENSSPAP00000024745Uncharacterized protein. (117 aa)
ENSSPAP00000024763BTB domain-containing protein. (203 aa)
ENSSPAP00000025083Vesicle transport through interaction with t-SNAREs 1A. (187 aa)
ankfy1Ankyrin repeat and FYVE domain containing 1. (943 aa)
ENSSPAP00000025829Uncharacterized protein. (143 aa)
vps53VPS53 subunit of GARP complex. (831 aa)
TMEM87BTransmembrane protein 87B. (588 aa)
LOC103369927TBC1 domain family, member 10Ab. (469 aa)
LOC103364794Dynactin 1a. (1260 aa)
LOC103371536Dynactin 1b. (1000 aa)
RIC1RIC1 homolog, RAB6A GEF complex partner 1. (1441 aa)
LOC103357602Ring finger protein 126. (311 aa)
vps51VPS51 subunit of GARP complex. (834 aa)
Your Current Organism:
Stegastes partitus
NCBI taxonomy Id: 144197
Other names: S. partitus, bicolor damselfish
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