(12 nodes) Neurotransmitter binding network (Stegastes partitus)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	ENSSPAP00000005316	Uncharacterized protein. (486 aa)
	LOC103357075	Si:ch211-39a7.1. (498 aa)
	grin3b	Glutamate receptor, ionotropic, N-methyl-D-aspartate 3Bb; Belongs to the glutamate-gated ion channel (TC 1.A.10.1) family. (1123 aa)
	LOC103358586	Uncharacterized protein. (507 aa)
	LOC103373183	Uncharacterized protein; Belongs to the glutamate-gated ion channel (TC 1.A.10.1) family. (971 aa)
	LOC103356520	Uncharacterized protein. (504 aa)
	LOC103373569	Uncharacterized protein. (542 aa)
	GRIN3A	Glutamate ionotropic receptor NMDA type subunit 3A; Belongs to the glutamate-gated ion channel (TC 1.A.10.1) family. (1126 aa)
	LOC103362275	NIPSNAP domain-containing protein. (282 aa)
	chrna7	Cholinergic receptor, nicotinic, alpha 7 (neuronal). (508 aa)
	nipsnap1	Nipsnap homolog 1 (C. elegans). (281 aa)
	nipsnap2	Nipsnap homolog 2. (286 aa)

Your Current Organism:

Stegastes partitus

NCBI taxonomy Id: 144197
Other names: S. partitus, bicolor damselfish

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

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a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
ENSSPAP00000005316	GRIN3A	ENSSPAP00000005316	ENSSPAP00000013993	Uncharacterized protein.	Glutamate ionotropic receptor NMDA type subunit 3A; Belongs to the glutamate-gated ion channel (TC 1.A.10.1) family.	0.471
ENSSPAP00000005316	LOC103358586	ENSSPAP00000005316	ENSSPAP00000020308	Uncharacterized protein.	Uncharacterized protein.	0.665
ENSSPAP00000005316	LOC103373183	ENSSPAP00000005316	ENSSPAP00000027606	Uncharacterized protein.	Uncharacterized protein; Belongs to the glutamate-gated ion channel (TC 1.A.10.1) family.	0.471
ENSSPAP00000005316	LOC103373569	ENSSPAP00000005316	ENSSPAP00000014206	Uncharacterized protein.	Uncharacterized protein.	0.665
ENSSPAP00000005316	grin3b	ENSSPAP00000005316	ENSSPAP00000016056	Uncharacterized protein.	Glutamate receptor, ionotropic, N-methyl-D-aspartate 3Bb; Belongs to the glutamate-gated ion channel (TC 1.A.10.1) family.	0.471
GRIN3A	ENSSPAP00000005316	ENSSPAP00000013993	ENSSPAP00000005316	Glutamate ionotropic receptor NMDA type subunit 3A; Belongs to the glutamate-gated ion channel (TC 1.A.10.1) family.	Uncharacterized protein.	0.471
GRIN3A	LOC103356520	ENSSPAP00000013993	ENSSPAP00000029758	Glutamate ionotropic receptor NMDA type subunit 3A; Belongs to the glutamate-gated ion channel (TC 1.A.10.1) family.	Uncharacterized protein.	0.471
GRIN3A	LOC103357075	ENSSPAP00000013993	ENSSPAP00000003522	Glutamate ionotropic receptor NMDA type subunit 3A; Belongs to the glutamate-gated ion channel (TC 1.A.10.1) family.	Si:ch211-39a7.1.	0.471
GRIN3A	LOC103358586	ENSSPAP00000013993	ENSSPAP00000020308	Glutamate ionotropic receptor NMDA type subunit 3A; Belongs to the glutamate-gated ion channel (TC 1.A.10.1) family.	Uncharacterized protein.	0.471
GRIN3A	LOC103373183	ENSSPAP00000013993	ENSSPAP00000027606	Glutamate ionotropic receptor NMDA type subunit 3A; Belongs to the glutamate-gated ion channel (TC 1.A.10.1) family.	Uncharacterized protein; Belongs to the glutamate-gated ion channel (TC 1.A.10.1) family.	0.629
GRIN3A	LOC103373569	ENSSPAP00000013993	ENSSPAP00000014206	Glutamate ionotropic receptor NMDA type subunit 3A; Belongs to the glutamate-gated ion channel (TC 1.A.10.1) family.	Uncharacterized protein.	0.471
GRIN3A	chrna7	ENSSPAP00000013993	ENSSPAP00000011168	Glutamate ionotropic receptor NMDA type subunit 3A; Belongs to the glutamate-gated ion channel (TC 1.A.10.1) family.	Cholinergic receptor, nicotinic, alpha 7 (neuronal).	0.471
GRIN3A	grin3b	ENSSPAP00000013993	ENSSPAP00000016056	Glutamate ionotropic receptor NMDA type subunit 3A; Belongs to the glutamate-gated ion channel (TC 1.A.10.1) family.	Glutamate receptor, ionotropic, N-methyl-D-aspartate 3Bb; Belongs to the glutamate-gated ion channel (TC 1.A.10.1) family.	0.630
LOC103356520	GRIN3A	ENSSPAP00000029758	ENSSPAP00000013993	Uncharacterized protein.	Glutamate ionotropic receptor NMDA type subunit 3A; Belongs to the glutamate-gated ion channel (TC 1.A.10.1) family.	0.471
LOC103356520	LOC103358586	ENSSPAP00000029758	ENSSPAP00000020308	Uncharacterized protein.	Uncharacterized protein.	0.522
LOC103356520	LOC103373183	ENSSPAP00000029758	ENSSPAP00000027606	Uncharacterized protein.	Uncharacterized protein; Belongs to the glutamate-gated ion channel (TC 1.A.10.1) family.	0.471
LOC103356520	LOC103373569	ENSSPAP00000029758	ENSSPAP00000014206	Uncharacterized protein.	Uncharacterized protein.	0.806
LOC103356520	grin3b	ENSSPAP00000029758	ENSSPAP00000016056	Uncharacterized protein.	Glutamate receptor, ionotropic, N-methyl-D-aspartate 3Bb; Belongs to the glutamate-gated ion channel (TC 1.A.10.1) family.	0.471
LOC103357075	GRIN3A	ENSSPAP00000003522	ENSSPAP00000013993	Si:ch211-39a7.1.	Glutamate ionotropic receptor NMDA type subunit 3A; Belongs to the glutamate-gated ion channel (TC 1.A.10.1) family.	0.471
LOC103357075	LOC103358586	ENSSPAP00000003522	ENSSPAP00000020308	Si:ch211-39a7.1.	Uncharacterized protein.	0.518