35 items (Stegastes partitus) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	hadha	Hydroxyacyl-CoA dehydrogenase trifunctional multienzyme complex subunit alpha a; Belongs to the enoyl-CoA hydratase/isomerase family. (770 aa)
	mpg	N-methylpurine DNA glycosylase. (294 aa)
	tfb2m	rRNA adenine N(6)-methyltransferase; Belongs to the class I-like SAM-binding methyltransferase superfamily. rRNA adenine N(6)-methyltransferase family. (453 aa)
	tfam	Transcription factor A, mitochondrial. (287 aa)
	tufm	Elongation factor Tu; This protein promotes the GTP-dependent binding of aminoacyl- tRNA to the A-site of ribosomes during protein biosynthesis. (452 aa)
	LOC103354591	ATP synthase subunit beta; Produces ATP from ADP in the presence of a proton gradient across the membrane. (517 aa)
	mterf2	Mitochondrial transcription termination factor 2. (375 aa)
	hsd17b10	Hydroxysteroid (17-beta) dehydrogenase 10; Belongs to the short-chain dehydrogenases/reductases (SDR) family. (260 aa)
	elac2	ElaC ribonuclease Z 2. (808 aa)
	twnk	Twinkle mtDNA helicase. (718 aa)
	LOC103355037	ATP synthase subunit beta; Produces ATP from ADP in the presence of a proton gradient across the membrane. (518 aa)
	hspa9	Heat shock protein 9; Belongs to the heat shock protein 70 family. (683 aa)
	LOC103356655	Uncharacterized protein. (379 aa)
	ddx28	DEAD (Asp-Glu-Ala-Asp) box polypeptide 28. (563 aa)
	prorp	Protein only RNase P catalytic subunit. (623 aa)
	LOC103367122	Hydroxyacyl-CoA dehydrogenase trifunctional multienzyme complex subunit alpha b; Belongs to the enoyl-CoA hydratase/isomerase family. (763 aa)
	poldip2	Polymerase (DNA-directed), delta interacting protein 2. (396 aa)
	lrpprc	Leucine-rich pentatricopeptide repeat containing. (1442 aa)
	hadhb	Hydroxyacyl-CoA dehydrogenase trifunctional multienzyme complex subunit beta; Belongs to the thiolase-like superfamily. Thiolase family. (473 aa)
	ENSSPAP00000021325	tRNA methyltransferase 10C, mitochondrial RNase P subunit. (395 aa)
	ssbp1	Single-stranded DNA binding protein 1. (147 aa)
	polg	Polymerase (DNA directed), gamma. (1195 aa)
	polg2	Polymerase (DNA directed), gamma 2, accessory subunit. (453 aa)
	supv3l1	SUV3-like helicase. (758 aa)
	dbt	Dihydrolipoamide acetyltransferase component of pyruvate dehydrogenase complex. (497 aa)
	tefm	Transcription elongation factor, mitochondrial. (374 aa)
	lonp1	Lon protease homolog, mitochondrial; ATP-dependent serine protease that mediates the selective degradation of misfolded, unassembled or oxidatively damaged polypeptides as well as certain short-lived regulatory proteins in the mitochondrial matrix. May also have a chaperone function in the assembly of inner membrane protein complexes. Participates in the regulation of mitochondrial gene expression and in the maintenance of the integrity of the mitochondrial genome. Binds to mitochondrial DNA in a site-specific manner; Belongs to the peptidase S16 family. (999 aa)
	LOC103359911	Ubiquinol-cytochrome c reductase complex assembly factor 2. (129 aa)
	MTERF1	Mitochondrial transcription termination factor 1. (384 aa)
	polrmt	DNA-directed RNA polymerase; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Belongs to the phage and mitochondrial RNA polymerase family. (1341 aa)
	tfb1m	rRNA adenine N(6)-methyltransferase; Belongs to the class I-like SAM-binding methyltransferase superfamily. rRNA adenine N(6)-methyltransferase family. (357 aa)
	fastkd2	FAST kinase domains 2. (666 aa)
	dhx30	DEAH (Asp-Glu-Ala-His) box helicase 30. (1167 aa)
	clpx	Caseinolytic mitochondrial matrix peptidase chaperone subunit b. (624 aa)
	grsf1	G-rich RNA sequence binding factor 1. (397 aa)

Your Current Organism:

Stegastes partitus

NCBI taxonomy Id: 144197
Other names: S. partitus, bicolor damselfish

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
ENSSPAP00000021325	elac2	ENSSPAP00000021325	ENSSPAP00000007553	tRNA methyltransferase 10C, mitochondrial RNase P subunit.	ElaC ribonuclease Z 2.	0.665
ENSSPAP00000021325	grsf1	ENSSPAP00000021325	ENSSPAP00000031069	tRNA methyltransferase 10C, mitochondrial RNase P subunit.	G-rich RNA sequence binding factor 1.	0.550
ENSSPAP00000021325	hsd17b10	ENSSPAP00000021325	ENSSPAP00000008167	tRNA methyltransferase 10C, mitochondrial RNase P subunit.	Hydroxysteroid (17-beta) dehydrogenase 10; Belongs to the short-chain dehydrogenases/reductases (SDR) family.	0.991
ENSSPAP00000021325	prorp	ENSSPAP00000021325	ENSSPAP00000001151	tRNA methyltransferase 10C, mitochondrial RNase P subunit.	Protein only RNase P catalytic subunit.	0.987
ENSSPAP00000021325	tefm	ENSSPAP00000021325	ENSSPAP00000014324	tRNA methyltransferase 10C, mitochondrial RNase P subunit.	Transcription elongation factor, mitochondrial.	0.448
ENSSPAP00000021325	tfb2m	ENSSPAP00000021325	ENSSPAP00000013936	tRNA methyltransferase 10C, mitochondrial RNase P subunit.	rRNA adenine N(6)-methyltransferase; Belongs to the class I-like SAM-binding methyltransferase superfamily. rRNA adenine N(6)-methyltransferase family.	0.511
LOC103354591	LOC103355037	ENSSPAP00000012932	ENSSPAP00000007108	ATP synthase subunit beta; Produces ATP from ADP in the presence of a proton gradient across the membrane.	ATP synthase subunit beta; Produces ATP from ADP in the presence of a proton gradient across the membrane.	0.951
LOC103354591	clpx	ENSSPAP00000012932	ENSSPAP00000030601	ATP synthase subunit beta; Produces ATP from ADP in the presence of a proton gradient across the membrane.	Caseinolytic mitochondrial matrix peptidase chaperone subunit b.	0.429
LOC103354591	hspa9	ENSSPAP00000012932	ENSSPAP00000006185	ATP synthase subunit beta; Produces ATP from ADP in the presence of a proton gradient across the membrane.	Heat shock protein 9; Belongs to the heat shock protein 70 family.	0.696
LOC103354591	tufm	ENSSPAP00000012932	ENSSPAP00000013135	ATP synthase subunit beta; Produces ATP from ADP in the presence of a proton gradient across the membrane.	Elongation factor Tu; This protein promotes the GTP-dependent binding of aminoacyl- tRNA to the A-site of ribosomes during protein biosynthesis.	0.866
LOC103355037	LOC103354591	ENSSPAP00000007108	ENSSPAP00000012932	ATP synthase subunit beta; Produces ATP from ADP in the presence of a proton gradient across the membrane.	ATP synthase subunit beta; Produces ATP from ADP in the presence of a proton gradient across the membrane.	0.951
LOC103355037	clpx	ENSSPAP00000007108	ENSSPAP00000030601	ATP synthase subunit beta; Produces ATP from ADP in the presence of a proton gradient across the membrane.	Caseinolytic mitochondrial matrix peptidase chaperone subunit b.	0.427
LOC103355037	hspa9	ENSSPAP00000007108	ENSSPAP00000006185	ATP synthase subunit beta; Produces ATP from ADP in the presence of a proton gradient across the membrane.	Heat shock protein 9; Belongs to the heat shock protein 70 family.	0.696
LOC103355037	tufm	ENSSPAP00000007108	ENSSPAP00000013135	ATP synthase subunit beta; Produces ATP from ADP in the presence of a proton gradient across the membrane.	Elongation factor Tu; This protein promotes the GTP-dependent binding of aminoacyl- tRNA to the A-site of ribosomes during protein biosynthesis.	0.866
LOC103356655	ddx28	ENSSPAP00000004951	ENSSPAP00000001289	Uncharacterized protein.	DEAD (Asp-Glu-Ala-Asp) box polypeptide 28.	0.400
LOC103356655	fastkd2	ENSSPAP00000004951	ENSSPAP00000026133	Uncharacterized protein.	FAST kinase domains 2.	0.559
LOC103367122	dbt	ENSSPAP00000000319	ENSSPAP00000015853	Hydroxyacyl-CoA dehydrogenase trifunctional multienzyme complex subunit alpha b; Belongs to the enoyl-CoA hydratase/isomerase family.	Dihydrolipoamide acetyltransferase component of pyruvate dehydrogenase complex.	0.849
LOC103367122	hadha	ENSSPAP00000000319	ENSSPAP00000022166	Hydroxyacyl-CoA dehydrogenase trifunctional multienzyme complex subunit alpha b; Belongs to the enoyl-CoA hydratase/isomerase family.	Hydroxyacyl-CoA dehydrogenase trifunctional multienzyme complex subunit alpha a; Belongs to the enoyl-CoA hydratase/isomerase family.	0.932
LOC103367122	hadhb	ENSSPAP00000000319	ENSSPAP00000022082	Hydroxyacyl-CoA dehydrogenase trifunctional multienzyme complex subunit alpha b; Belongs to the enoyl-CoA hydratase/isomerase family.	Hydroxyacyl-CoA dehydrogenase trifunctional multienzyme complex subunit beta; Belongs to the thiolase-like superfamily. Thiolase family.	0.999
LOC103367122	hsd17b10	ENSSPAP00000000319	ENSSPAP00000008167	Hydroxyacyl-CoA dehydrogenase trifunctional multienzyme complex subunit alpha b; Belongs to the enoyl-CoA hydratase/isomerase family.	Hydroxysteroid (17-beta) dehydrogenase 10; Belongs to the short-chain dehydrogenases/reductases (SDR) family.	0.873