(29 nodes) Alpha-tubulin binding network (Stegastes partitus)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	fnta	Farnesyltransferase, CAAX box, alpha. (372 aa)
	FAM110A	Family with sequence similarity 110 member A. (467 aa)
	tbce	Tubulin folding cofactor E. (520 aa)
	MAP11	Microtubule associated protein 11. (540 aa)
	tbcb	Tubulin folding cofactor B. (246 aa)
	ENSSPAP00000015712	Uncharacterized protein. (520 aa)
	SPAST	Spastin; Belongs to the AAA ATPase family. (477 aa)
	ofd1	OFD1 centriole and centriolar satellite protein. (1066 aa)
	ino80	INO80 complex ATPase subunit. (1467 aa)
	SETD2	SET domain containing 2, histone lysine methyltransferase. (2604 aa)
	fam110b	Family with sequence similarity 110 member B. (481 aa)
	map11	Microtubule associated protein 1. (571 aa)
	washc1	WAS protein family homolog 1. (474 aa)
	ttll7	Tubulin tyrosine ligase-like family, member 7. (822 aa)
	ENSSPAP00000000771	TPR_REGION domain-containing protein. (131 aa)
	LOC103369552	Tubulin folding cofactor E-like a. (429 aa)
	ENSSPAP00000019010	Family with sequence similarity 110 member C. (326 aa)
	LOC103375470	Uncharacterized protein. (312 aa)
	LOC103354623	Family with sequence similarity 110 member A. (420 aa)
	LOC103359259	Uncharacterized protein. (634 aa)
	ENSSPAP00000021937	Uncharacterized protein. (80 aa)
	ENSSPAP00000022781	Uncharacterized protein. (88 aa)
	ENSSPAP00000022849	PARK2 co-regulated. (145 aa)
	efhc2	EF-hand domain (C-terminal) containing 2. (676 aa)
	LOC103367059	Si:ch211-107n13.1. (448 aa)
	LOC103354815	Tubulin folding cofactor E-like b. (433 aa)
	racgap1	Rac GTPase activating protein 1. (631 aa)
	ENSSPAP00000026657	Rho-GAP domain-containing protein. (97 aa)
	efhc1	EF-hand domain (C-terminal) containing 1. (614 aa)

Your Current Organism:

Stegastes partitus

NCBI taxonomy Id: 144197
Other names: S. partitus, bicolor damselfish

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structured XML interaction data, according to the 'PSI-MI' data standard

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a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
ENSSPAP00000000771	efhc1	ENSSPAP00000000771	ENSSPAP00000028693	TPR_REGION domain-containing protein.	EF-hand domain (C-terminal) containing 1.	0.424
ENSSPAP00000000771	ofd1	ENSSPAP00000000771	ENSSPAP00000010303	TPR_REGION domain-containing protein.	OFD1 centriole and centriolar satellite protein.	0.539
ENSSPAP00000022781	ENSSPAP00000022849	ENSSPAP00000022781	ENSSPAP00000022849	Uncharacterized protein.	PARK2 co-regulated.	0.480
ENSSPAP00000022781	efhc1	ENSSPAP00000022781	ENSSPAP00000028693	Uncharacterized protein.	EF-hand domain (C-terminal) containing 1.	0.912
ENSSPAP00000022781	efhc2	ENSSPAP00000022781	ENSSPAP00000023874	Uncharacterized protein.	EF-hand domain (C-terminal) containing 2.	0.912
ENSSPAP00000022849	ENSSPAP00000022781	ENSSPAP00000022849	ENSSPAP00000022781	PARK2 co-regulated.	Uncharacterized protein.	0.480
ENSSPAP00000022849	efhc1	ENSSPAP00000022849	ENSSPAP00000028693	PARK2 co-regulated.	EF-hand domain (C-terminal) containing 1.	0.937
ENSSPAP00000022849	efhc2	ENSSPAP00000022849	ENSSPAP00000023874	PARK2 co-regulated.	EF-hand domain (C-terminal) containing 2.	0.938
LOC103354815	tbcb	ENSSPAP00000025850	ENSSPAP00000014691	Tubulin folding cofactor E-like b.	Tubulin folding cofactor B.	0.507
LOC103369552	tbcb	ENSSPAP00000010875	ENSSPAP00000014691	Tubulin folding cofactor E-like a.	Tubulin folding cofactor B.	0.507
SETD2	ino80	ENSSPAP00000008897	ENSSPAP00000010282	SET domain containing 2, histone lysine methyltransferase.	INO80 complex ATPase subunit.	0.616
efhc1	ENSSPAP00000000771	ENSSPAP00000028693	ENSSPAP00000000771	EF-hand domain (C-terminal) containing 1.	TPR_REGION domain-containing protein.	0.424
efhc1	ENSSPAP00000022781	ENSSPAP00000028693	ENSSPAP00000022781	EF-hand domain (C-terminal) containing 1.	Uncharacterized protein.	0.912
efhc1	ENSSPAP00000022849	ENSSPAP00000028693	ENSSPAP00000022849	EF-hand domain (C-terminal) containing 1.	PARK2 co-regulated.	0.937
efhc1	efhc2	ENSSPAP00000028693	ENSSPAP00000023874	EF-hand domain (C-terminal) containing 1.	EF-hand domain (C-terminal) containing 2.	0.896
efhc2	ENSSPAP00000022781	ENSSPAP00000023874	ENSSPAP00000022781	EF-hand domain (C-terminal) containing 2.	Uncharacterized protein.	0.912
efhc2	ENSSPAP00000022849	ENSSPAP00000023874	ENSSPAP00000022849	EF-hand domain (C-terminal) containing 2.	PARK2 co-regulated.	0.938
efhc2	efhc1	ENSSPAP00000023874	ENSSPAP00000028693	EF-hand domain (C-terminal) containing 2.	EF-hand domain (C-terminal) containing 1.	0.896
ino80	SETD2	ENSSPAP00000010282	ENSSPAP00000008897	INO80 complex ATPase subunit.	SET domain containing 2, histone lysine methyltransferase.	0.616
ino80	ofd1	ENSSPAP00000010282	ENSSPAP00000010303	INO80 complex ATPase subunit.	OFD1 centriole and centriolar satellite protein.	0.546