(19 nodes) Laminin binding network (Stegastes partitus)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	mcam	Melanoma cell adhesion molecule b. (711 aa)
	LOC103371033	Dystroglycan 1. (891 aa)
	LOC103368266	Uncharacterized protein; Belongs to the G-protein coupled receptor 2 family. (1156 aa)
	LOC103358771	Extracellular matrix protein 1a. (139 aa)
	LOC103376172	Melanoma cell adhesion molecule a. (599 aa)
	LOC103373760	Galectin. (338 aa)
	rpsa	40S ribosomal protein SA; Required for the assembly and/or stability of the 40S ribosomal subunit. Required for the processing of the 20S rRNA- precursor to mature 18S rRNA in a late step of the maturation of 40S ribosomal subunits. Also functions as a cell surface receptor for laminin. Plays a role in cell adhesion to the basement membrane and in the consequent activation of signaling transduction pathways. May play a role in cell fate determination and tissue morphogenesis. Belongs to the universal ribosomal protein uS2 family. (301 aa)
	LOC103375511	Si:dkey-202e22.2. (558 aa)
	LOC103373135	Peptidase S72 domain-containing protein. (881 aa)
	bcam	Basal cell adhesion molecule (Lutheran blood group). (548 aa)
	ENSSPAP00000016973	Adhesion G protein-coupled receptor G4b; Belongs to the G-protein coupled receptor 2 family. (431 aa)
	agrn	Agrin. (2085 aa)
	LOC103358322	Uncharacterized protein. (637 aa)
	LOC103353910	Galectin. (295 aa)
	ntn4	Netrin 4. (659 aa)
	adgrg6	Adhesion G protein-coupled receptor G6; Belongs to the G-protein coupled receptor 2 family. (1247 aa)
	ecm1	Uncharacterized protein. (569 aa)
	LOC103354448	Peptidase S72 domain-containing protein. (910 aa)
	LOC103359954	Galectin. (376 aa)

Your Current Organism:

Stegastes partitus

NCBI taxonomy Id: 144197
Other names: S. partitus, bicolor damselfish

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
LOC103354448	LOC103358322	ENSSPAP00000003995	ENSSPAP00000007045	Peptidase S72 domain-containing protein.	Uncharacterized protein.	0.583
LOC103354448	LOC103371033	ENSSPAP00000003995	ENSSPAP00000031011	Peptidase S72 domain-containing protein.	Dystroglycan 1.	0.933
LOC103354448	LOC103375511	ENSSPAP00000003995	ENSSPAP00000021204	Peptidase S72 domain-containing protein.	Si:dkey-202e22.2.	0.583
LOC103354448	agrn	ENSSPAP00000003995	ENSSPAP00000012357	Peptidase S72 domain-containing protein.	Agrin.	0.961
LOC103354448	ntn4	ENSSPAP00000003995	ENSSPAP00000004190	Peptidase S72 domain-containing protein.	Netrin 4.	0.583
LOC103358322	LOC103354448	ENSSPAP00000007045	ENSSPAP00000003995	Uncharacterized protein.	Peptidase S72 domain-containing protein.	0.583
LOC103358322	LOC103371033	ENSSPAP00000007045	ENSSPAP00000031011	Uncharacterized protein.	Dystroglycan 1.	0.583
LOC103358322	LOC103373135	ENSSPAP00000007045	ENSSPAP00000017723	Uncharacterized protein.	Peptidase S72 domain-containing protein.	0.583
LOC103371033	LOC103354448	ENSSPAP00000031011	ENSSPAP00000003995	Dystroglycan 1.	Peptidase S72 domain-containing protein.	0.933
LOC103371033	LOC103358322	ENSSPAP00000031011	ENSSPAP00000007045	Dystroglycan 1.	Uncharacterized protein.	0.583
LOC103371033	LOC103375511	ENSSPAP00000031011	ENSSPAP00000021204	Dystroglycan 1.	Si:dkey-202e22.2.	0.583
LOC103371033	agrn	ENSSPAP00000031011	ENSSPAP00000012357	Dystroglycan 1.	Agrin.	0.961
LOC103371033	ntn4	ENSSPAP00000031011	ENSSPAP00000004190	Dystroglycan 1.	Netrin 4.	0.583
LOC103373135	LOC103358322	ENSSPAP00000017723	ENSSPAP00000007045	Peptidase S72 domain-containing protein.	Uncharacterized protein.	0.583
LOC103373135	LOC103375511	ENSSPAP00000017723	ENSSPAP00000021204	Peptidase S72 domain-containing protein.	Si:dkey-202e22.2.	0.583
LOC103373135	agrn	ENSSPAP00000017723	ENSSPAP00000012357	Peptidase S72 domain-containing protein.	Agrin.	0.924
LOC103373135	ntn4	ENSSPAP00000017723	ENSSPAP00000004190	Peptidase S72 domain-containing protein.	Netrin 4.	0.583
LOC103375511	LOC103354448	ENSSPAP00000021204	ENSSPAP00000003995	Si:dkey-202e22.2.	Peptidase S72 domain-containing protein.	0.583
LOC103375511	LOC103371033	ENSSPAP00000021204	ENSSPAP00000031011	Si:dkey-202e22.2.	Dystroglycan 1.	0.583
LOC103375511	LOC103373135	ENSSPAP00000021204	ENSSPAP00000017723	Si:dkey-202e22.2.	Peptidase S72 domain-containing protein.	0.583