(14 nodes) Laminin complex network (Stegastes partitus)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	LOC103362005	Laminin, beta 2-like. (1842 aa)
	ENSSPAP00000001228	Uncharacterized protein. (546 aa)
	ENSSPAP00000001331	Uncharacterized protein. (887 aa)
	LOC103366621	Laminin, beta 1a. (1724 aa)
	ntn4	Netrin 4. (659 aa)
	ntng2	Netrin G2. (530 aa)
	LOC103358322	Uncharacterized protein. (637 aa)
	ENSSPAP00000007341	Netrin g1a. (537 aa)
	NTNG2	Netrin g2a. (550 aa)
	ENSSPAP00000008357	Vav 3 guanine nucleotide exchange factor b. (448 aa)
	ENSSPAP00000019126	Laminin N-terminal domain-containing protein. (293 aa)
	LOC103364103	Laminin, beta 1b. (1818 aa)
	LOC103375511	Si:dkey-202e22.2. (558 aa)
	lamb2	Laminin, beta 2 (laminin S). (1765 aa)

Your Current Organism:

Stegastes partitus

NCBI taxonomy Id: 144197
Other names: S. partitus, bicolor damselfish

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structured XML interaction data, according to the 'PSI-MI' data standard

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

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a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
ENSSPAP00000001228	ENSSPAP00000007341	ENSSPAP00000001228	ENSSPAP00000007341	Uncharacterized protein.	Netrin g1a.	0.505
ENSSPAP00000001228	ENSSPAP00000008357	ENSSPAP00000001228	ENSSPAP00000008357	Uncharacterized protein.	Vav 3 guanine nucleotide exchange factor b.	0.505
ENSSPAP00000001228	ENSSPAP00000019126	ENSSPAP00000001228	ENSSPAP00000019126	Uncharacterized protein.	Laminin N-terminal domain-containing protein.	0.540
ENSSPAP00000001228	LOC103362005	ENSSPAP00000001228	ENSSPAP00000029046	Uncharacterized protein.	Laminin, beta 2-like.	0.645
ENSSPAP00000001228	LOC103364103	ENSSPAP00000001228	ENSSPAP00000020328	Uncharacterized protein.	Laminin, beta 1b.	0.645
ENSSPAP00000001228	LOC103366621	ENSSPAP00000001228	ENSSPAP00000003518	Uncharacterized protein.	Laminin, beta 1a.	0.703
ENSSPAP00000001228	lamb2	ENSSPAP00000001228	ENSSPAP00000028905	Uncharacterized protein.	Laminin, beta 2 (laminin S).	0.703
ENSSPAP00000001331	ENSSPAP00000007341	ENSSPAP00000001331	ENSSPAP00000007341	Uncharacterized protein.	Netrin g1a.	0.532
ENSSPAP00000001331	ENSSPAP00000008357	ENSSPAP00000001331	ENSSPAP00000008357	Uncharacterized protein.	Vav 3 guanine nucleotide exchange factor b.	0.505
ENSSPAP00000001331	ENSSPAP00000019126	ENSSPAP00000001331	ENSSPAP00000019126	Uncharacterized protein.	Laminin N-terminal domain-containing protein.	0.544
ENSSPAP00000001331	LOC103362005	ENSSPAP00000001331	ENSSPAP00000029046	Uncharacterized protein.	Laminin, beta 2-like.	0.645
ENSSPAP00000001331	LOC103364103	ENSSPAP00000001331	ENSSPAP00000020328	Uncharacterized protein.	Laminin, beta 1b.	0.645
ENSSPAP00000001331	LOC103366621	ENSSPAP00000001331	ENSSPAP00000003518	Uncharacterized protein.	Laminin, beta 1a.	0.703
ENSSPAP00000001331	LOC103375511	ENSSPAP00000001331	ENSSPAP00000021204	Uncharacterized protein.	Si:dkey-202e22.2.	0.591
ENSSPAP00000001331	NTNG2	ENSSPAP00000001331	ENSSPAP00000007612	Uncharacterized protein.	Netrin g2a.	0.437
ENSSPAP00000001331	lamb2	ENSSPAP00000001331	ENSSPAP00000028905	Uncharacterized protein.	Laminin, beta 2 (laminin S).	0.703
ENSSPAP00000001331	ntn4	ENSSPAP00000001331	ENSSPAP00000004190	Uncharacterized protein.	Netrin 4.	0.546
ENSSPAP00000007341	ENSSPAP00000001228	ENSSPAP00000007341	ENSSPAP00000001228	Netrin g1a.	Uncharacterized protein.	0.505
ENSSPAP00000007341	ENSSPAP00000001331	ENSSPAP00000007341	ENSSPAP00000001331	Netrin g1a.	Uncharacterized protein.	0.532
ENSSPAP00000007341	ENSSPAP00000008357	ENSSPAP00000007341	ENSSPAP00000008357	Netrin g1a.	Vav 3 guanine nucleotide exchange factor b.	0.648