23 items (Stegastes partitus) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	sp1	Sp1 transcription factor. (710 aa)
	ATP5F1A	ATP synthase subunit alpha; Produces ATP from ADP in the presence of a proton gradient across the membrane. (551 aa)
	ENSSPAP00000001400	Uncharacterized protein. (1302 aa)
	igf2	Insulin-like growth factor 2b. (215 aa)
	LOC103360542	ADAM metallopeptidase domain 17a. (876 aa)
	LOC103355037	ATP synthase subunit beta; Produces ATP from ADP in the presence of a proton gradient across the membrane. (518 aa)
	ENSSPAP00000031321	Vascular endothelial growth factor c; Belongs to the PDGF/VEGF growth factor family. (305 aa)
	LOC103360654	SHSP domain-containing protein; Belongs to the small heat shock protein (HSP20) family. (204 aa)
	sirt1	Deacetylase sirtuin-type domain-containing protein. (695 aa)
	LOC103370644	CD40 molecule, TNF receptor superfamily member 5. (300 aa)
	nfe2l2	Nuclear factor, erythroid 2-like 2a. (613 aa)
	LOC103354591	ATP synthase subunit beta; Produces ATP from ADP in the presence of a proton gradient across the membrane. (517 aa)
	LOC103363938	Fibroblast growth factor; Belongs to the heparin-binding growth factors family. (210 aa)
	fgf2	Fibroblast growth factor; Belongs to the heparin-binding growth factors family. (155 aa)
	LOC103358541	Platelet-derived growth factor beta polypeptide b; Belongs to the PDGF/VEGF growth factor family. (520 aa)
	LOC103357988	ATP synthase subunit alpha; Produces ATP from ADP in the presence of a proton gradient across the membrane. (551 aa)
	cib1	Calcium and integrin binding 1 (calmyrin). (189 aa)
	LOC103359300	Fibroblast growth factor 18a; Belongs to the heparin-binding growth factors family. (210 aa)
	LOC103363690	Heat shock protein, alpha-crystallin-related, 1; Belongs to the small heat shock protein (HSP20) family. (202 aa)
	pdgfb	PDGF_2 domain-containing protein; Belongs to the PDGF/VEGF growth factor family. (569 aa)
	LOC103371395	ADAM metallopeptidase domain 17b. (836 aa)
	vegfa	Vascular endothelial growth factor Ab; Belongs to the PDGF/VEGF growth factor family. (212 aa)
	LOC103373263	Transforming growth factor beta; Belongs to the TGF-beta family. (384 aa)

Your Current Organism:

Stegastes partitus

NCBI taxonomy Id: 144197
Other names: S. partitus, bicolor damselfish

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structured XML interaction data, according to the 'PSI-MI' data standard

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

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a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
ATP5F1A	LOC103354591	ENSSPAP00000001061	ENSSPAP00000012932	ATP synthase subunit alpha; Produces ATP from ADP in the presence of a proton gradient across the membrane.	ATP synthase subunit beta; Produces ATP from ADP in the presence of a proton gradient across the membrane.	0.998
ATP5F1A	LOC103355037	ENSSPAP00000001061	ENSSPAP00000007108	ATP synthase subunit alpha; Produces ATP from ADP in the presence of a proton gradient across the membrane.	ATP synthase subunit beta; Produces ATP from ADP in the presence of a proton gradient across the membrane.	0.998
ATP5F1A	LOC103357988	ENSSPAP00000001061	ENSSPAP00000019656	ATP synthase subunit alpha; Produces ATP from ADP in the presence of a proton gradient across the membrane.	ATP synthase subunit alpha; Produces ATP from ADP in the presence of a proton gradient across the membrane.	0.543
ENSSPAP00000031321	LOC103358541	ENSSPAP00000031321	ENSSPAP00000017591	Vascular endothelial growth factor c; Belongs to the PDGF/VEGF growth factor family.	Platelet-derived growth factor beta polypeptide b; Belongs to the PDGF/VEGF growth factor family.	0.860
ENSSPAP00000031321	fgf2	ENSSPAP00000031321	ENSSPAP00000015061	Vascular endothelial growth factor c; Belongs to the PDGF/VEGF growth factor family.	Fibroblast growth factor; Belongs to the heparin-binding growth factors family.	0.419
ENSSPAP00000031321	pdgfb	ENSSPAP00000031321	ENSSPAP00000023607	Vascular endothelial growth factor c; Belongs to the PDGF/VEGF growth factor family.	PDGF_2 domain-containing protein; Belongs to the PDGF/VEGF growth factor family.	0.860
ENSSPAP00000031321	vegfa	ENSSPAP00000031321	ENSSPAP00000029406	Vascular endothelial growth factor c; Belongs to the PDGF/VEGF growth factor family.	Vascular endothelial growth factor Ab; Belongs to the PDGF/VEGF growth factor family.	0.851
LOC103354591	ATP5F1A	ENSSPAP00000012932	ENSSPAP00000001061	ATP synthase subunit beta; Produces ATP from ADP in the presence of a proton gradient across the membrane.	ATP synthase subunit alpha; Produces ATP from ADP in the presence of a proton gradient across the membrane.	0.998
LOC103354591	LOC103355037	ENSSPAP00000012932	ENSSPAP00000007108	ATP synthase subunit beta; Produces ATP from ADP in the presence of a proton gradient across the membrane.	ATP synthase subunit beta; Produces ATP from ADP in the presence of a proton gradient across the membrane.	0.951
LOC103354591	LOC103357988	ENSSPAP00000012932	ENSSPAP00000019656	ATP synthase subunit beta; Produces ATP from ADP in the presence of a proton gradient across the membrane.	ATP synthase subunit alpha; Produces ATP from ADP in the presence of a proton gradient across the membrane.	0.998
LOC103355037	ATP5F1A	ENSSPAP00000007108	ENSSPAP00000001061	ATP synthase subunit beta; Produces ATP from ADP in the presence of a proton gradient across the membrane.	ATP synthase subunit alpha; Produces ATP from ADP in the presence of a proton gradient across the membrane.	0.998
LOC103355037	LOC103354591	ENSSPAP00000007108	ENSSPAP00000012932	ATP synthase subunit beta; Produces ATP from ADP in the presence of a proton gradient across the membrane.	ATP synthase subunit beta; Produces ATP from ADP in the presence of a proton gradient across the membrane.	0.951
LOC103355037	LOC103357988	ENSSPAP00000007108	ENSSPAP00000019656	ATP synthase subunit beta; Produces ATP from ADP in the presence of a proton gradient across the membrane.	ATP synthase subunit alpha; Produces ATP from ADP in the presence of a proton gradient across the membrane.	0.998
LOC103357988	ATP5F1A	ENSSPAP00000019656	ENSSPAP00000001061	ATP synthase subunit alpha; Produces ATP from ADP in the presence of a proton gradient across the membrane.	ATP synthase subunit alpha; Produces ATP from ADP in the presence of a proton gradient across the membrane.	0.543
LOC103357988	LOC103354591	ENSSPAP00000019656	ENSSPAP00000012932	ATP synthase subunit alpha; Produces ATP from ADP in the presence of a proton gradient across the membrane.	ATP synthase subunit beta; Produces ATP from ADP in the presence of a proton gradient across the membrane.	0.998
LOC103357988	LOC103355037	ENSSPAP00000019656	ENSSPAP00000007108	ATP synthase subunit alpha; Produces ATP from ADP in the presence of a proton gradient across the membrane.	ATP synthase subunit beta; Produces ATP from ADP in the presence of a proton gradient across the membrane.	0.998
LOC103358541	ENSSPAP00000031321	ENSSPAP00000017591	ENSSPAP00000031321	Platelet-derived growth factor beta polypeptide b; Belongs to the PDGF/VEGF growth factor family.	Vascular endothelial growth factor c; Belongs to the PDGF/VEGF growth factor family.	0.860
LOC103358541	fgf2	ENSSPAP00000017591	ENSSPAP00000015061	Platelet-derived growth factor beta polypeptide b; Belongs to the PDGF/VEGF growth factor family.	Fibroblast growth factor; Belongs to the heparin-binding growth factors family.	0.506
LOC103358541	igf2	ENSSPAP00000017591	ENSSPAP00000002061	Platelet-derived growth factor beta polypeptide b; Belongs to the PDGF/VEGF growth factor family.	Insulin-like growth factor 2b.	0.680
LOC103358541	vegfa	ENSSPAP00000017591	ENSSPAP00000029406	Platelet-derived growth factor beta polypeptide b; Belongs to the PDGF/VEGF growth factor family.	Vascular endothelial growth factor Ab; Belongs to the PDGF/VEGF growth factor family.	0.850