STRINGSTRING
mib1 mib1 tnfrsf21 tnfrsf21 nkx6-2 nkx6-2 LOC103373263 LOC103373263 LOC103362116 LOC103362116 aspa aspa LOC103376574 LOC103376574 LOC103360939 LOC103360939 LOC103372465 LOC103372465 nr1d1 nr1d1 cntn2 cntn2 LOC103359716 LOC103359716 spint1 spint1 nf1 nf1 tmem98 tmem98 serpine2 serpine2 f2 f2 LOC103372969 LOC103372969 mtor mtor nkx6-1 nkx6-1 il34 il34 LOC103368660 LOC103368660 gsx2 gsx2
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
mib1Mindbomb E3 ubiquitin protein ligase 1. (1020 aa)
tnfrsf21Tumor necrosis factor receptor superfamily, member 21. (687 aa)
nkx6-2NK6 homeobox 2. (283 aa)
LOC103373263Transforming growth factor beta; Belongs to the TGF-beta family. (384 aa)
LOC103362116Zinc finger protein 16 like. (481 aa)
aspaAspartoacylase. (422 aa)
LOC103376574Nuclear receptor subfamily 1, group D, member 4b. (571 aa)
LOC103360939Aspartoacylase (aminocyclase) 3, tandem duplicate 2. (309 aa)
LOC103372465Protein tyrosine phosphatase receptor type Z1a. (1334 aa)
nr1d1Nuclear receptor subfamily 1, group d, member 1. (514 aa)
cntn2Contactin 2. (1040 aa)
LOC103359716Uncharacterized protein. (318 aa)
spint1Serine peptidase inhibitor, Kunitz type 1 a. (504 aa)
nf1Neurofibromin 1b. (2780 aa)
tmem98Transmembrane protein 98. (224 aa)
serpine2Serpin peptidase inhibitor, clade E (nexin, plasminogen activator inhibitor type 1), member 2; Belongs to the serpin family. (397 aa)
f2Prothrombin; Thrombin, which cleaves bonds after Arg and Lys, converts fibrinogen to fibrin and activates factors V, VII, VIII, XIII, and, in complex with thrombomodulin, protein C. Functions in blood homeostasis, inflammation and wound healing; Belongs to the peptidase S1 family. (615 aa)
LOC103372969Uncharacterized protein. (896 aa)
mtorSerine/threonine-protein kinase TOR; Belongs to the PI3/PI4-kinase family. (2514 aa)
nkx6-1NK6 homeobox 1. (303 aa)
il34Interleukin 34. (215 aa)
LOC103368660Serine peptidase inhibitor, Kunitz type 1 b. (508 aa)
gsx2GS homeobox 2. (238 aa)
Your Current Organism:
Stegastes partitus
NCBI taxonomy Id: 144197
Other names: S. partitus, bicolor damselfish
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