STRINGSTRING
ppie ppie LOC103368281 LOC103368281 LOC103361028 LOC103361028 TMEM250 TMEM250 LOC103357771 LOC103357771 ppid ppid top2b top2b LOC103371800 LOC103371800 tsg101 tsg101 ENSSPAP00000009628 ENSSPAP00000009628 ENSSPAP00000012187 ENSSPAP00000012187 tbc1d20 tbc1d20 dhx9 dhx9 ddb1 ddb1 vps37b vps37b pde12 pde12 LOC103358571 LOC103358571 LOC103367548 LOC103367548 atg12 atg12 atg5 atg5 adar adar top2a top2a
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
ppiePeptidyl-prolyl cis-trans isomerase E; Catalyzes the cis-trans isomerization of proline imidic peptide bonds in proteins; Belongs to the cyclophilin-type PPIase family. PPIase E subfamily. (302 aa)
LOC103368281Galectin. (135 aa)
LOC103361028Uncharacterized protein; Belongs to the peptidase S1 family. (459 aa)
TMEM250Transmembrane protein 250. (139 aa)
LOC103357771Remodeling and spacing factor 1b, tandem duplicate 1. (1726 aa)
ppidPeptidylprolyl isomerase D. (370 aa)
top2bDNA topoisomerase 2; Control of topological states of DNA by transient breakage and subsequent rejoining of DNA strands. Topoisomerase II makes double- strand breaks. (1611 aa)
LOC103371800Galectin. (131 aa)
tsg101Tumor susceptibility 101a. (390 aa)
ENSSPAP00000009628UEV domain-containing protein. (86 aa)
ENSSPAP00000012187Peptidylprolyl isomerase. (281 aa)
tbc1d20TBC1 domain family, member 20. (397 aa)
dhx9DEAH (Asp-Glu-Ala-His) box helicase 9. (1269 aa)
ddb1Damage-specific DNA binding protein 1. (1085 aa)
vps37bZgc:114173. (283 aa)
pde12Phosphodiesterase 12. (591 aa)
LOC103358571Zgc:63863. (412 aa)
LOC103367548Uncharacterized protein. (473 aa)
atg12Ubiquitin-like protein ATG12; Ubiquitin-like protein involved in autophagic vesicle formation; Belongs to the ATG12 family. (117 aa)
atg5Autophagy protein 5; Involved in autophagic vesicle formation. (264 aa)
adarAdenosine deaminase RNA specific. (1338 aa)
top2aDNA topoisomerase 2; Control of topological states of DNA by transient breakage and subsequent rejoining of DNA strands. Topoisomerase II makes double- strand breaks. (1569 aa)
Your Current Organism:
Stegastes partitus
NCBI taxonomy Id: 144197
Other names: S. partitus, bicolor damselfish
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