(19 nodes) Post-embryonic animal organ development network (Stegastes partitus)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	grxcr1	Glutaredoxin and cysteine rich domain containing 1 a. (293 aa)
	ENSSPAP00000000221	Glutaredoxin and cysteine rich domain containing 1 b. (124 aa)
	LOC103371539	DUF3736 domain-containing protein. (1179 aa)
	ENSSPAP00000029185	Uncharacterized protein. (456 aa)
	ENSSPAP00000028083	Uncharacterized protein. (221 aa)
	ercc1	Excision repair cross-complementation group 1. (361 aa)
	LOC103357552	Zgc:153993. (205 aa)
	LOC103364619	Peptidylprolyl isomerase. (298 aa)
	fkbp14	Peptidylprolyl isomerase. (211 aa)
	sema3d	Sema domain, immunoglobulin domain (Ig), short basic domain, secreted, (semaphorin) 3D; Belongs to the semaphorin family. (949 aa)
	slc37a4	Solute carrier family 37 member 4a. (429 aa)
	gse1	Gse1 coiled-coil protein. (2130 aa)
	LOC103357897	Solute carrier family 37 member 4b. (450 aa)
	ddx55	RNA helicase. (601 aa)
	bax	BCL2 associated X, apoptosis regulator a. (192 aa)
	trim33	Tripartite motif containing 33. (1204 aa)
	bhlhe23	Basic helix-loop-helix family, member e23. (222 aa)
	vgll2	Vestigial-like family member 2a. (290 aa)
	znf330	Zinc finger protein 330. (320 aa)

Your Current Organism:

Stegastes partitus

NCBI taxonomy Id: 144197
Other names: S. partitus, bicolor damselfish

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structured XML interaction data, according to the 'PSI-MI' data standard

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

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a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
ENSSPAP00000028083	LOC103357552	ENSSPAP00000028083	ENSSPAP00000028974	Uncharacterized protein.	Zgc:153993.	0.994
ENSSPAP00000028083	bax	ENSSPAP00000028083	ENSSPAP00000015004	Uncharacterized protein.	BCL2 associated X, apoptosis regulator a.	0.993
LOC103357552	ENSSPAP00000028083	ENSSPAP00000028974	ENSSPAP00000028083	Zgc:153993.	Uncharacterized protein.	0.994
LOC103357552	bax	ENSSPAP00000028974	ENSSPAP00000015004	Zgc:153993.	BCL2 associated X, apoptosis regulator a.	0.991
bax	ENSSPAP00000028083	ENSSPAP00000015004	ENSSPAP00000028083	BCL2 associated X, apoptosis regulator a.	Uncharacterized protein.	0.993
bax	LOC103357552	ENSSPAP00000015004	ENSSPAP00000028974	BCL2 associated X, apoptosis regulator a.	Zgc:153993.	0.991