(10 nodes) Embryonic neurocranium morphogenesis network (Stegastes partitus)

Nodes:

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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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query proteins and first shell of interactors

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second shell of interactors

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proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

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Known Interactions

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experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	rbm24	RNA binding motif protein 24a. (231 aa)
	fgf3	Fibroblast growth factor; Belongs to the heparin-binding growth factors family. (247 aa)
	fgf8	Fibroblast growth factor; Belongs to the heparin-binding growth factors family. (213 aa)
	LOC103360059	RNA binding motif protein 24b. (236 aa)
	ENSSPAP00000007934	HintC domain-containing protein. (246 aa)
	gata3	GATA binding protein 3. (443 aa)
	med12	Med12 domain-containing protein. (2087 aa)
	sec23a	Protein transport protein SEC23; Component of the coat protein complex II (COPII) which promotes the formation of transport vesicles from the endoplasmic reticulum (ER). The coat has two main functions, the physical deformation of the endoplasmic reticulum membrane into vesicles and the selection of cargo molecules; Belongs to the SEC23/SEC24 family. SEC23 subfamily. (764 aa)
	shh	Hedgehog protein; Intercellular signal essential for a variety of patterning events during development. (415 aa)
	pdgfrb	Platelet-derived growth factor receptor, beta polypeptide; Belongs to the protein kinase superfamily. Tyr protein kinase family. CSF-1/PDGF receptor subfamily. (1051 aa)

Your Current Organism:

Stegastes partitus

NCBI taxonomy Id: 144197
Other names: S. partitus, bicolor damselfish

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
ENSSPAP00000007934	fgf8	ENSSPAP00000007934	ENSSPAP00000018468	HintC domain-containing protein.	Fibroblast growth factor; Belongs to the heparin-binding growth factors family.	0.485
fgf3	fgf8	ENSSPAP00000029108	ENSSPAP00000018468	Fibroblast growth factor; Belongs to the heparin-binding growth factors family.	Fibroblast growth factor; Belongs to the heparin-binding growth factors family.	0.818
fgf3	pdgfrb	ENSSPAP00000029108	ENSSPAP00000001383	Fibroblast growth factor; Belongs to the heparin-binding growth factors family.	Platelet-derived growth factor receptor, beta polypeptide; Belongs to the protein kinase superfamily. Tyr protein kinase family. CSF-1/PDGF receptor subfamily.	0.912
fgf8	ENSSPAP00000007934	ENSSPAP00000018468	ENSSPAP00000007934	Fibroblast growth factor; Belongs to the heparin-binding growth factors family.	HintC domain-containing protein.	0.485
fgf8	fgf3	ENSSPAP00000018468	ENSSPAP00000029108	Fibroblast growth factor; Belongs to the heparin-binding growth factors family.	Fibroblast growth factor; Belongs to the heparin-binding growth factors family.	0.818
fgf8	pdgfrb	ENSSPAP00000018468	ENSSPAP00000001383	Fibroblast growth factor; Belongs to the heparin-binding growth factors family.	Platelet-derived growth factor receptor, beta polypeptide; Belongs to the protein kinase superfamily. Tyr protein kinase family. CSF-1/PDGF receptor subfamily.	0.911
fgf8	shh	ENSSPAP00000018468	ENSSPAP00000001460	Fibroblast growth factor; Belongs to the heparin-binding growth factors family.	Hedgehog protein; Intercellular signal essential for a variety of patterning events during development.	0.485
pdgfrb	fgf3	ENSSPAP00000001383	ENSSPAP00000029108	Platelet-derived growth factor receptor, beta polypeptide; Belongs to the protein kinase superfamily. Tyr protein kinase family. CSF-1/PDGF receptor subfamily.	Fibroblast growth factor; Belongs to the heparin-binding growth factors family.	0.912
pdgfrb	fgf8	ENSSPAP00000001383	ENSSPAP00000018468	Platelet-derived growth factor receptor, beta polypeptide; Belongs to the protein kinase superfamily. Tyr protein kinase family. CSF-1/PDGF receptor subfamily.	Fibroblast growth factor; Belongs to the heparin-binding growth factors family.	0.911
shh	fgf8	ENSSPAP00000001460	ENSSPAP00000018468	Hedgehog protein; Intercellular signal essential for a variety of patterning events during development.	Fibroblast growth factor; Belongs to the heparin-binding growth factors family.	0.485