STRINGSTRING
nf1 nf1 nkx6-1 nkx6-1 il34 il34 LOC103372465 LOC103372465 gsx2 gsx2 LOC103360939 LOC103360939 mtor mtor tmem98 tmem98 aspa aspa LOC103362116 LOC103362116 nkx6-2 nkx6-2 tnfrsf21 tnfrsf21 LOC103359716 LOC103359716
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
nf1Neurofibromin 1b. (2780 aa)
nkx6-1NK6 homeobox 1. (303 aa)
il34Interleukin 34. (215 aa)
LOC103372465Protein tyrosine phosphatase receptor type Z1a. (1334 aa)
gsx2GS homeobox 2. (238 aa)
LOC103360939Aspartoacylase (aminocyclase) 3, tandem duplicate 2. (309 aa)
mtorSerine/threonine-protein kinase TOR; Belongs to the PI3/PI4-kinase family. (2514 aa)
tmem98Transmembrane protein 98. (224 aa)
aspaAspartoacylase. (422 aa)
LOC103362116Zinc finger protein 16 like. (481 aa)
nkx6-2NK6 homeobox 2. (283 aa)
tnfrsf21Tumor necrosis factor receptor superfamily, member 21. (687 aa)
LOC103359716Uncharacterized protein. (318 aa)
Your Current Organism:
Stegastes partitus
NCBI taxonomy Id: 144197
Other names: S. partitus, bicolor damselfish
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