STRINGSTRING
pnkp pnkp LOC103369363 LOC103369363 LOC103371748 LOC103371748 lig3 lig3 lig4 lig4
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
pnkpPolynucleotide kinase 3'-phosphatase. (607 aa)
LOC103369363X-ray repair complementing defective repair in Chinese hamster cells 4. (336 aa)
LOC103371748Uncharacterized protein. (297 aa)
lig3DNA ligase. (1014 aa)
lig4DNA ligase. (910 aa)
Your Current Organism:
Stegastes partitus
NCBI taxonomy Id: 144197
Other names: S. partitus, bicolor damselfish
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.