STRINGSTRING
ski ski LOC103362339 LOC103362339 rnf10 rnf10 ENSSPAP00000021286 ENSSPAP00000021286 LOC103370367 LOC103370367 ENSSPAP00000031321 ENSSPAP00000031321 rb1 rb1 nf1 nf1 mecp2 mecp2
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
skiV-ski avian sarcoma viral oncogene homolog a. (746 aa)
LOC103362339Interleukin-1. (247 aa)
rnf10Ring finger protein 10. (787 aa)
ENSSPAP00000021286FERM domain-containing protein. (84 aa)
LOC103370367Neurofibromin 2b (merlin). (589 aa)
ENSSPAP00000031321Vascular endothelial growth factor c; Belongs to the PDGF/VEGF growth factor family. (305 aa)
rb1Retinoblastoma 1. (909 aa)
nf1Neurofibromin 1b. (2780 aa)
mecp2Methyl CpG binding protein 2. (974 aa)
Your Current Organism:
Stegastes partitus
NCBI taxonomy Id: 144197
Other names: S. partitus, bicolor damselfish
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