STRINGSTRING
klf5 klf5 LOC103371083 LOC103371083 nkx3-2 nkx3-2 LOC103357491 LOC103357491 LOC103372969 LOC103372969 prdm1 prdm1 epg5 epg5 LOC103355350 LOC103355350 LOC103362578 LOC103362578
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
klf5Progesterone immunomodulatory binding factor 1. (510 aa)
LOC103371083PR domain containing 1b, with ZNF domain. (601 aa)
nkx3-2NK3 homeobox 2. (252 aa)
LOC103357491Kruppel-like factor 5b. (443 aa)
LOC103372969Uncharacterized protein. (896 aa)
prdm1Uncharacterized protein. (773 aa)
epg5Ectopic P-granules autophagy protein 5 homolog (C. elegans). (2458 aa)
LOC103355350Kruppel-like factor 5 like. (443 aa)
LOC103362578PR domain containing 1a, with ZNF domain. (859 aa)
Your Current Organism:
Stegastes partitus
NCBI taxonomy Id: 144197
Other names: S. partitus, bicolor damselfish
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