(34 nodes) Response to interleukin-1 network (Stegastes partitus)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	YTHDC2	YTH domain containing 2. (1402 aa)
	rc3h1	Ring finger and CCCH-type domains 1b. (1136 aa)
	LOC103359160	Immunoresponsive gene 1, like. (497 aa)
	zc3h12a	Zinc finger CCCH-type containing 12A. (621 aa)
	LOC103362339	Interleukin-1. (247 aa)
	LOC103362330	NK3 homeobox 1. (192 aa)
	LOC103361723	TNF receptor-associated factor; Belongs to the TNF receptor-associated factor family. (577 aa)
	rbmx	RNA binding motif protein X-linked. (393 aa)
	acod1	Aconitate decarboxylase 1. (474 aa)
	LOC103370644	CD40 molecule, TNF receptor superfamily member 5. (300 aa)
	gclc	Glutamate-cysteine ligase, catalytic subunit. (630 aa)
	map2k7	Mitogen-activated protein kinase kinase 7. (439 aa)
	usp10	Ubiquitin carboxyl-terminal hydrolase. (879 aa)
	irak1	Interleukin-1 receptor-associated kinase 1. (548 aa)
	smpd1	Sphingomyelin phosphodiesterase; Converts sphingomyelin to ceramide. (598 aa)
	akap12	A kinase (PRKA) anchor protein 12b. (1460 aa)
	LOC103359396	Hyaluronidase. (434 aa)
	ripk2	Receptor-interacting serine-threonine kinase 2. (582 aa)
	rps6ka5	Ribosomal protein S6 kinase. (801 aa)
	ENSSPAP00000000091	TRAF family member-associated NFKB activator. (242 aa)
	LOC103360356	Ribosomal protein S6 kinase. (784 aa)
	ENSSPAP00000031224	SCY domain-containing protein. (91 aa)
	LOC103372675	Cbp/p300-interacting transactivator 1-like. (153 aa)
	ENSSPAP00000029263	Uncharacterized protein. (118 aa)
	LOC103374411	Si:dkey-206d17.12. (601 aa)
	LOC103371455	Homeobox protein Nkx-3.1-like. (192 aa)
	nr1d1	Nuclear receptor subfamily 1, group d, member 1. (514 aa)
	pcsk1	Proprotein convertase subtilisin/kexin type 1; Belongs to the peptidase S8 family. (778 aa)
	LOC103376103	Tumor necrosis factor receptor superfamily, member 11a, NFKB activator. (661 aa)
	ENSSPAP00000022040	Chemokine (C-C motif) ligand 25b. (99 aa)
	cited1	Cbp/p300-interacting transactivator, with Glu/Asp-rich carboxy-terminal domain, 1. (153 aa)
	LOC103367507	TNF receptor-associated factor 6-like. (569 aa)
	LOC103372055	Uncharacterized protein. (475 aa)
	LOC103372054	Uncharacterized protein. (645 aa)

Your Current Organism:

Stegastes partitus

NCBI taxonomy Id: 144197
Other names: S. partitus, bicolor damselfish

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
ENSSPAP00000000091	LOC103361723	ENSSPAP00000000091	ENSSPAP00000013042	TRAF family member-associated NFKB activator.	TNF receptor-associated factor; Belongs to the TNF receptor-associated factor family.	0.828
ENSSPAP00000000091	LOC103367507	ENSSPAP00000000091	ENSSPAP00000021403	TRAF family member-associated NFKB activator.	TNF receptor-associated factor 6-like.	0.828
ENSSPAP00000000091	LOC103370644	ENSSPAP00000000091	ENSSPAP00000008871	TRAF family member-associated NFKB activator.	CD40 molecule, TNF receptor superfamily member 5.	0.476
ENSSPAP00000000091	LOC103374411	ENSSPAP00000000091	ENSSPAP00000027802	TRAF family member-associated NFKB activator.	Si:dkey-206d17.12.	0.631
ENSSPAP00000000091	irak1	ENSSPAP00000000091	ENSSPAP00000006801	TRAF family member-associated NFKB activator.	Interleukin-1 receptor-associated kinase 1.	0.569
ENSSPAP00000000091	zc3h12a	ENSSPAP00000000091	ENSSPAP00000016517	TRAF family member-associated NFKB activator.	Zinc finger CCCH-type containing 12A.	0.636
ENSSPAP00000022040	ENSSPAP00000031224	ENSSPAP00000022040	ENSSPAP00000031224	Chemokine (C-C motif) ligand 25b.	SCY domain-containing protein.	0.661
ENSSPAP00000031224	ENSSPAP00000022040	ENSSPAP00000031224	ENSSPAP00000022040	SCY domain-containing protein.	Chemokine (C-C motif) ligand 25b.	0.661
LOC103359160	acod1	ENSSPAP00000017047	ENSSPAP00000008949	Immunoresponsive gene 1, like.	Aconitate decarboxylase 1.	0.900
LOC103359396	irak1	ENSSPAP00000003800	ENSSPAP00000006801	Hyaluronidase.	Interleukin-1 receptor-associated kinase 1.	0.406
LOC103359396	map2k7	ENSSPAP00000003800	ENSSPAP00000007541	Hyaluronidase.	Mitogen-activated protein kinase kinase 7.	0.528
LOC103359396	ripk2	ENSSPAP00000003800	ENSSPAP00000002933	Hyaluronidase.	Receptor-interacting serine-threonine kinase 2.	0.409
LOC103360356	irak1	ENSSPAP00000031262	ENSSPAP00000006801	Ribosomal protein S6 kinase.	Interleukin-1 receptor-associated kinase 1.	0.464
LOC103360356	rps6ka5	ENSSPAP00000031262	ENSSPAP00000000431	Ribosomal protein S6 kinase.	Ribosomal protein S6 kinase.	0.899
LOC103361723	ENSSPAP00000000091	ENSSPAP00000013042	ENSSPAP00000000091	TNF receptor-associated factor; Belongs to the TNF receptor-associated factor family.	TRAF family member-associated NFKB activator.	0.828
LOC103361723	LOC103362339	ENSSPAP00000013042	ENSSPAP00000015284	TNF receptor-associated factor; Belongs to the TNF receptor-associated factor family.	Interleukin-1.	0.789
LOC103361723	LOC103370644	ENSSPAP00000013042	ENSSPAP00000008871	TNF receptor-associated factor; Belongs to the TNF receptor-associated factor family.	CD40 molecule, TNF receptor superfamily member 5.	0.987
LOC103361723	LOC103372054	ENSSPAP00000013042	ENSSPAP00000021216	TNF receptor-associated factor; Belongs to the TNF receptor-associated factor family.	Uncharacterized protein.	0.904
LOC103361723	LOC103372055	ENSSPAP00000013042	ENSSPAP00000021250	TNF receptor-associated factor; Belongs to the TNF receptor-associated factor family.	Uncharacterized protein.	0.904
LOC103361723	LOC103376103	ENSSPAP00000013042	ENSSPAP00000024109	TNF receptor-associated factor; Belongs to the TNF receptor-associated factor family.	Tumor necrosis factor receptor superfamily, member 11a, NFKB activator.	0.972