(8 nodes) Contractile ring network (Stegastes partitus)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	LOC103354448	Peptidase S72 domain-containing protein. (910 aa)
	alkbh4	AlkB homolog 4, lysine demthylase. (282 aa)
	LOC103363107	Protein regulator of cytokinesis 1a. (604 aa)
	LOC103373135	Peptidase S72 domain-containing protein. (881 aa)
	prc1	Protein regulator of cytokinesis 1b. (613 aa)
	anln	Anillin, actin binding protein. (1161 aa)
	LOC103371033	Dystroglycan 1. (891 aa)
	LOC103369298	Anillin domain-containing protein. (638 aa)

Your Current Organism:

Stegastes partitus

NCBI taxonomy Id: 144197
Other names: S. partitus, bicolor damselfish

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structured XML interaction data, according to the 'PSI-MI' data standard

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

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a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
LOC103354448	LOC103371033	ENSSPAP00000003995	ENSSPAP00000031011	Peptidase S72 domain-containing protein.	Dystroglycan 1.	0.933
LOC103363107	LOC103369298	ENSSPAP00000030558	ENSSPAP00000023210	Protein regulator of cytokinesis 1a.	Anillin domain-containing protein.	0.706
LOC103363107	anln	ENSSPAP00000030558	ENSSPAP00000009449	Protein regulator of cytokinesis 1a.	Anillin, actin binding protein.	0.706
LOC103369298	LOC103363107	ENSSPAP00000023210	ENSSPAP00000030558	Anillin domain-containing protein.	Protein regulator of cytokinesis 1a.	0.706
LOC103369298	prc1	ENSSPAP00000023210	ENSSPAP00000001628	Anillin domain-containing protein.	Protein regulator of cytokinesis 1b.	0.706
LOC103371033	LOC103354448	ENSSPAP00000031011	ENSSPAP00000003995	Dystroglycan 1.	Peptidase S72 domain-containing protein.	0.933
anln	LOC103363107	ENSSPAP00000009449	ENSSPAP00000030558	Anillin, actin binding protein.	Protein regulator of cytokinesis 1a.	0.706
anln	prc1	ENSSPAP00000009449	ENSSPAP00000001628	Anillin, actin binding protein.	Protein regulator of cytokinesis 1b.	0.706
prc1	LOC103369298	ENSSPAP00000001628	ENSSPAP00000023210	Protein regulator of cytokinesis 1b.	Anillin domain-containing protein.	0.706
prc1	anln	ENSSPAP00000001628	ENSSPAP00000009449	Protein regulator of cytokinesis 1b.	Anillin, actin binding protein.	0.706