STRINGSTRING
exosc10 exosc10 pinx1 pinx1 men1 men1 ENSSPAP00000028301 ENSSPAP00000028301 bmpr2 bmpr2 LOC103358411 LOC103358411 LOC103369128 LOC103369128 nat10 nat10 ENSSPAP00000019535 ENSSPAP00000019535 ENSSPAP00000019704 ENSSPAP00000019704 terf1 terf1 acd acd terf2 terf2 parp3 parp3 chek1 chek1 ENSSPAP00000004083 ENSSPAP00000004083 gnl3l gnl3l
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
exosc10Exosome component 10. (892 aa)
pinx1PIN2 (TERF1) interacting telomerase inhibitor 1. (358 aa)
men1Multiple endocrine neoplasia I. (626 aa)
ENSSPAP00000028301Telo_bind domain-containing protein. (326 aa)
bmpr2Receptor protein serine/threonine kinase; Belongs to the protein kinase superfamily. TKL Ser/Thr protein kinase family. TGFB receptor subfamily. (1067 aa)
LOC103358411TERF1 (TRF1)-interacting nuclear factor 2. (492 aa)
LOC103369128Serine/threonine-protein kinase receptor; Belongs to the protein kinase superfamily. TKL Ser/Thr protein kinase family. TGFB receptor subfamily. (1005 aa)
nat10RNA cytidine acetyltransferase; RNA cytidine acetyltransferase with specificity toward both 18S rRNA and tRNAs. Catalyzes the formation of N(4)-acetylcytidine (ac4C) in 18S rRNA. Required for early nucleolar cleavages of precursor rRNA at sites A0, A1 and A2 during 18S rRNA synthesis. Catalyzes the formation of ac4C in serine and leucine tRNAs. Requires the tRNA- binding adapter protein THUMPD1 for full tRNA acetyltransferase activity but not for 18S rRNA acetylation. (1037 aa)
ENSSPAP00000019535TEN1 subunit of CST complex. (124 aa)
ENSSPAP00000019704Decapping mRNA 2. (248 aa)
terf1Telomeric repeat-binding factor; Binds the telomeric double-stranded 5'-TTAGGG-3' repeat. (361 aa)
acdUncharacterized protein. (471 aa)
terf2HTH myb-type domain-containing protein. (637 aa)
parp3Poly [ADP-ribose] polymerase. (529 aa)
chek1Checkpoint kinase 1; Belongs to the protein kinase superfamily. (457 aa)
ENSSPAP00000004083Telo_bind domain-containing protein. (212 aa)
gnl3lGuanine nucleotide binding protein-like 3 (nucleolar)-like. (597 aa)
Your Current Organism:
Stegastes partitus
NCBI taxonomy Id: 144197
Other names: S. partitus, bicolor damselfish
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