(10 nodes) Dystroglycan complex network (Stegastes partitus)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	LOC103354448	Peptidase S72 domain-containing protein. (910 aa)
	sgce	Sarcoglycan, epsilon. (453 aa)
	LOC103363895	Uncharacterized protein. (264 aa)
	sgcz	Uncharacterized protein. (308 aa)
	sgcd	Sarcoglycan, delta (dystrophin-associated glycoprotein). (291 aa)
	LOC103373135	Peptidase S72 domain-containing protein. (881 aa)
	sgcb	Sarcoglycan, beta (dystrophin-associated glycoprotein). (316 aa)
	LOC103372021	Sarcoglycan, alpha. (383 aa)
	sgcg	Sarcoglycan, gamma. (290 aa)
	LOC103371033	Dystroglycan 1. (891 aa)

Your Current Organism:

Stegastes partitus

NCBI taxonomy Id: 144197
Other names: S. partitus, bicolor damselfish

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

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a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
LOC103354448	LOC103363895	ENSSPAP00000003995	ENSSPAP00000006271	Peptidase S72 domain-containing protein.	Uncharacterized protein.	0.641
LOC103354448	LOC103371033	ENSSPAP00000003995	ENSSPAP00000031011	Peptidase S72 domain-containing protein.	Dystroglycan 1.	0.933
LOC103354448	LOC103372021	ENSSPAP00000003995	ENSSPAP00000020130	Peptidase S72 domain-containing protein.	Sarcoglycan, alpha.	0.651
LOC103354448	sgcb	ENSSPAP00000003995	ENSSPAP00000019609	Peptidase S72 domain-containing protein.	Sarcoglycan, beta (dystrophin-associated glycoprotein).	0.681
LOC103354448	sgcd	ENSSPAP00000003995	ENSSPAP00000010058	Peptidase S72 domain-containing protein.	Sarcoglycan, delta (dystrophin-associated glycoprotein).	0.641
LOC103354448	sgce	ENSSPAP00000003995	ENSSPAP00000004719	Peptidase S72 domain-containing protein.	Sarcoglycan, epsilon.	0.651
LOC103354448	sgcg	ENSSPAP00000003995	ENSSPAP00000021494	Peptidase S72 domain-containing protein.	Sarcoglycan, gamma.	0.729
LOC103354448	sgcz	ENSSPAP00000003995	ENSSPAP00000007486	Peptidase S72 domain-containing protein.	Uncharacterized protein.	0.641
LOC103363895	LOC103354448	ENSSPAP00000006271	ENSSPAP00000003995	Uncharacterized protein.	Peptidase S72 domain-containing protein.	0.641
LOC103363895	LOC103371033	ENSSPAP00000006271	ENSSPAP00000031011	Uncharacterized protein.	Dystroglycan 1.	0.641
LOC103363895	LOC103372021	ENSSPAP00000006271	ENSSPAP00000020130	Uncharacterized protein.	Sarcoglycan, alpha.	0.670
LOC103363895	LOC103373135	ENSSPAP00000006271	ENSSPAP00000017723	Uncharacterized protein.	Peptidase S72 domain-containing protein.	0.641
LOC103363895	sgcb	ENSSPAP00000006271	ENSSPAP00000019609	Uncharacterized protein.	Sarcoglycan, beta (dystrophin-associated glycoprotein).	0.675
LOC103363895	sgce	ENSSPAP00000006271	ENSSPAP00000004719	Uncharacterized protein.	Sarcoglycan, epsilon.	0.670
LOC103363895	sgcg	ENSSPAP00000006271	ENSSPAP00000021494	Uncharacterized protein.	Sarcoglycan, gamma.	0.589
LOC103371033	LOC103354448	ENSSPAP00000031011	ENSSPAP00000003995	Dystroglycan 1.	Peptidase S72 domain-containing protein.	0.933
LOC103371033	LOC103363895	ENSSPAP00000031011	ENSSPAP00000006271	Dystroglycan 1.	Uncharacterized protein.	0.641
LOC103371033	LOC103372021	ENSSPAP00000031011	ENSSPAP00000020130	Dystroglycan 1.	Sarcoglycan, alpha.	0.651
LOC103371033	sgcb	ENSSPAP00000031011	ENSSPAP00000019609	Dystroglycan 1.	Sarcoglycan, beta (dystrophin-associated glycoprotein).	0.681
LOC103371033	sgcd	ENSSPAP00000031011	ENSSPAP00000010058	Dystroglycan 1.	Sarcoglycan, delta (dystrophin-associated glycoprotein).	0.641