17 items (Stegastes partitus) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	LOC103352880	Lysosomal associated membrane protein 1b. (252 aa)
	LOC103361567	Elastin microfibril interfacer 2a. (1120 aa)
	pip4p1	Phosphatidylinositol-4,5-bisphosphate 4-phosphatase; Catalyzes the hydrolysis of phosphatidylinositol-4,5- bisphosphate (PtdIns-4,5-P2) to phosphatidylinositol-4-phosphate (PtdIns-4-P). (270 aa)
	coro6	Coronin; Belongs to the WD repeat coronin family. (423 aa)
	lamp1	Lysosomal associated membrane protein 1a. (415 aa)
	LOC103363410	Phosphatidylinositol-4,5-bisphosphate 4-phosphatase; Catalyzes the hydrolysis of phosphatidylinositol-4,5- bisphosphate (PtdIns-4,5-P2) to phosphatidylinositol-4-phosphate (PtdIns-4-P). (247 aa)
	pip4p2	Phosphatidylinositol-4,5-bisphosphate 4-phosphatase; Catalyzes the hydrolysis of phosphatidylinositol-4,5- bisphosphate (PtdIns-4,5-P2) to phosphatidylinositol-4-phosphate (PtdIns-4-P). (256 aa)
	inpp5b	Inositol polyphosphate-5-phosphatase B. (858 aa)
	ENSSPAP00000014896	Uncharacterized protein. (217 aa)
	ENSSPAP00000012938	RAB9B, member RAS oncogene family. (219 aa)
	LOC103365899	Si:dkey-13a21.4. (194 aa)
	ocrl	OCRL inositol polyphosphate-5-phosphatase. (958 aa)
	LOC103375269	Coronin; Belongs to the WD repeat coronin family. (509 aa)
	RAB9A	RAB9A, member RAS oncogene family. (206 aa)
	ofd1	OFD1 centriole and centriolar satellite protein. (1066 aa)
	LOC103367326	Coronin; Belongs to the WD repeat coronin family. (456 aa)
	LOC103375504	Phosphatidylinositol-4,5-bisphosphate 4-phosphatase; Catalyzes the hydrolysis of phosphatidylinositol-4,5- bisphosphate (PtdIns-4,5-P2) to phosphatidylinositol-4-phosphate (PtdIns-4-P). (275 aa)

Your Current Organism:

Stegastes partitus

NCBI taxonomy Id: 144197
Other names: S. partitus, bicolor damselfish

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structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

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node degree of proteins in your network (given the current score cut-off)

... network coordinates:

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a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

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MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

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a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
ENSSPAP00000012938	ENSSPAP00000014896	ENSSPAP00000012938	ENSSPAP00000014896	RAB9B, member RAS oncogene family.	Uncharacterized protein.	0.899
ENSSPAP00000012938	RAB9A	ENSSPAP00000012938	ENSSPAP00000010386	RAB9B, member RAS oncogene family.	RAB9A, member RAS oncogene family.	0.899
ENSSPAP00000014896	ENSSPAP00000012938	ENSSPAP00000014896	ENSSPAP00000012938	Uncharacterized protein.	RAB9B, member RAS oncogene family.	0.899
ENSSPAP00000014896	RAB9A	ENSSPAP00000014896	ENSSPAP00000010386	Uncharacterized protein.	RAB9A, member RAS oncogene family.	0.899
LOC103352880	lamp1	ENSSPAP00000008425	ENSSPAP00000006523	Lysosomal associated membrane protein 1b.	Lysosomal associated membrane protein 1a.	0.831
LOC103363410	LOC103375504	ENSSPAP00000007954	ENSSPAP00000020547	Phosphatidylinositol-4,5-bisphosphate 4-phosphatase; Catalyzes the hydrolysis of phosphatidylinositol-4,5- bisphosphate (PtdIns-4,5-P2) to phosphatidylinositol-4-phosphate (PtdIns-4-P).	Phosphatidylinositol-4,5-bisphosphate 4-phosphatase; Catalyzes the hydrolysis of phosphatidylinositol-4,5- bisphosphate (PtdIns-4,5-P2) to phosphatidylinositol-4-phosphate (PtdIns-4-P).	0.823
LOC103363410	pip4p1	ENSSPAP00000007954	ENSSPAP00000001586	Phosphatidylinositol-4,5-bisphosphate 4-phosphatase; Catalyzes the hydrolysis of phosphatidylinositol-4,5- bisphosphate (PtdIns-4,5-P2) to phosphatidylinositol-4-phosphate (PtdIns-4-P).	Phosphatidylinositol-4,5-bisphosphate 4-phosphatase; Catalyzes the hydrolysis of phosphatidylinositol-4,5- bisphosphate (PtdIns-4,5-P2) to phosphatidylinositol-4-phosphate (PtdIns-4-P).	0.832
LOC103363410	pip4p2	ENSSPAP00000007954	ENSSPAP00000019584	Phosphatidylinositol-4,5-bisphosphate 4-phosphatase; Catalyzes the hydrolysis of phosphatidylinositol-4,5- bisphosphate (PtdIns-4,5-P2) to phosphatidylinositol-4-phosphate (PtdIns-4-P).	Phosphatidylinositol-4,5-bisphosphate 4-phosphatase; Catalyzes the hydrolysis of phosphatidylinositol-4,5- bisphosphate (PtdIns-4,5-P2) to phosphatidylinositol-4-phosphate (PtdIns-4-P).	0.837
LOC103375504	LOC103363410	ENSSPAP00000020547	ENSSPAP00000007954	Phosphatidylinositol-4,5-bisphosphate 4-phosphatase; Catalyzes the hydrolysis of phosphatidylinositol-4,5- bisphosphate (PtdIns-4,5-P2) to phosphatidylinositol-4-phosphate (PtdIns-4-P).	Phosphatidylinositol-4,5-bisphosphate 4-phosphatase; Catalyzes the hydrolysis of phosphatidylinositol-4,5- bisphosphate (PtdIns-4,5-P2) to phosphatidylinositol-4-phosphate (PtdIns-4-P).	0.823
LOC103375504	pip4p1	ENSSPAP00000020547	ENSSPAP00000001586	Phosphatidylinositol-4,5-bisphosphate 4-phosphatase; Catalyzes the hydrolysis of phosphatidylinositol-4,5- bisphosphate (PtdIns-4,5-P2) to phosphatidylinositol-4-phosphate (PtdIns-4-P).	Phosphatidylinositol-4,5-bisphosphate 4-phosphatase; Catalyzes the hydrolysis of phosphatidylinositol-4,5- bisphosphate (PtdIns-4,5-P2) to phosphatidylinositol-4-phosphate (PtdIns-4-P).	0.832
LOC103375504	pip4p2	ENSSPAP00000020547	ENSSPAP00000019584	Phosphatidylinositol-4,5-bisphosphate 4-phosphatase; Catalyzes the hydrolysis of phosphatidylinositol-4,5- bisphosphate (PtdIns-4,5-P2) to phosphatidylinositol-4-phosphate (PtdIns-4-P).	Phosphatidylinositol-4,5-bisphosphate 4-phosphatase; Catalyzes the hydrolysis of phosphatidylinositol-4,5- bisphosphate (PtdIns-4,5-P2) to phosphatidylinositol-4-phosphate (PtdIns-4-P).	0.834
RAB9A	ENSSPAP00000012938	ENSSPAP00000010386	ENSSPAP00000012938	RAB9A, member RAS oncogene family.	RAB9B, member RAS oncogene family.	0.899
RAB9A	ENSSPAP00000014896	ENSSPAP00000010386	ENSSPAP00000014896	RAB9A, member RAS oncogene family.	Uncharacterized protein.	0.899
inpp5b	ocrl	ENSSPAP00000016557	ENSSPAP00000012783	Inositol polyphosphate-5-phosphatase B.	OCRL inositol polyphosphate-5-phosphatase.	0.902
lamp1	LOC103352880	ENSSPAP00000006523	ENSSPAP00000008425	Lysosomal associated membrane protein 1a.	Lysosomal associated membrane protein 1b.	0.831
ocrl	inpp5b	ENSSPAP00000012783	ENSSPAP00000016557	OCRL inositol polyphosphate-5-phosphatase.	Inositol polyphosphate-5-phosphatase B.	0.902
pip4p1	LOC103363410	ENSSPAP00000001586	ENSSPAP00000007954	Phosphatidylinositol-4,5-bisphosphate 4-phosphatase; Catalyzes the hydrolysis of phosphatidylinositol-4,5- bisphosphate (PtdIns-4,5-P2) to phosphatidylinositol-4-phosphate (PtdIns-4-P).	Phosphatidylinositol-4,5-bisphosphate 4-phosphatase; Catalyzes the hydrolysis of phosphatidylinositol-4,5- bisphosphate (PtdIns-4,5-P2) to phosphatidylinositol-4-phosphate (PtdIns-4-P).	0.832
pip4p1	LOC103375504	ENSSPAP00000001586	ENSSPAP00000020547	Phosphatidylinositol-4,5-bisphosphate 4-phosphatase; Catalyzes the hydrolysis of phosphatidylinositol-4,5- bisphosphate (PtdIns-4,5-P2) to phosphatidylinositol-4-phosphate (PtdIns-4-P).	Phosphatidylinositol-4,5-bisphosphate 4-phosphatase; Catalyzes the hydrolysis of phosphatidylinositol-4,5- bisphosphate (PtdIns-4,5-P2) to phosphatidylinositol-4-phosphate (PtdIns-4-P).	0.832
pip4p1	pip4p2	ENSSPAP00000001586	ENSSPAP00000019584	Phosphatidylinositol-4,5-bisphosphate 4-phosphatase; Catalyzes the hydrolysis of phosphatidylinositol-4,5- bisphosphate (PtdIns-4,5-P2) to phosphatidylinositol-4-phosphate (PtdIns-4-P).	Phosphatidylinositol-4,5-bisphosphate 4-phosphatase; Catalyzes the hydrolysis of phosphatidylinositol-4,5- bisphosphate (PtdIns-4,5-P2) to phosphatidylinositol-4-phosphate (PtdIns-4-P).	0.833
pip4p2	LOC103363410	ENSSPAP00000019584	ENSSPAP00000007954	Phosphatidylinositol-4,5-bisphosphate 4-phosphatase; Catalyzes the hydrolysis of phosphatidylinositol-4,5- bisphosphate (PtdIns-4,5-P2) to phosphatidylinositol-4-phosphate (PtdIns-4-P).	Phosphatidylinositol-4,5-bisphosphate 4-phosphatase; Catalyzes the hydrolysis of phosphatidylinositol-4,5- bisphosphate (PtdIns-4,5-P2) to phosphatidylinositol-4-phosphate (PtdIns-4-P).	0.837