38 items (Stegastes partitus) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	LOC103372886	Protein kinase C and casein kinase substrate in neurons 1a. (439 aa)
	ENSSPAP00000018500	Pleckstrin and Sec7 domain containing a. (303 aa)
	ENSSPAP00000018449	SEC7 domain-containing protein. (180 aa)
	LOC103373074	Eps8 like 1b. (514 aa)
	LOC103369633	Si:ch211-51c14.1. (388 aa)
	LOC103373067	Zgc:91999. (387 aa)
	ARHGEF2	Rho/rac guanine nucleotide exchange factor (GEF) 2. (910 aa)
	eps8l1	Eps8 like 1a. (508 aa)
	plek	Pleckstrin. (351 aa)
	spry2	Sprouty RTK signaling antagonist 2. (353 aa)
	pacsin3	Protein kinase C and casein kinase substrate in neurons 3. (443 aa)
	ENSSPAP00000009775	Pleckstrin homology domain containing, family A (phosphoinositide binding specific) member 1b. (301 aa)
	sh3yl1	SH3 and SYLF domain containing 1. (352 aa)
	LOC103366961	Integrin beta. (429 aa)
	SPDEF-2	SAM pointed domain containing ETS transcription factor. (326 aa)
	LOC103356923	Rho guanine nucleotide exchange factor (GEF) 1a. (903 aa)
	kank1	KN motif and ankyrin repeat domains 1. (1334 aa)
	LOC103363766	Uncharacterized protein. (192 aa)
	ENSSPAP00000029981	KN motif and ankyrin repeat domains 1b. (1113 aa)
	AIF1	Allograft inflammatory factor 1. (147 aa)
	ENSSPAP00000000692	SEC7 domain-containing protein. (195 aa)
	ENSSPAP00000000729	PH_9 domain-containing protein. (275 aa)
	psd2	Pleckstrin and Sec7 domain containing 2. (927 aa)
	SPDEF	SAM pointed domain containing ETS transcription factor. (334 aa)
	LOC103355721	Protein kinase C and casein kinase substrate in neurons 1b. (444 aa)
	LOC103368296	Uncharacterized protein. (1106 aa)
	arfgap3	ADP-ribosylation factor GTPase activating protein 3. (532 aa)
	pacsin2	Protein kinase C and casein kinase substrate in neurons 2. (504 aa)
	kank3	KN motif and ankyrin repeat domains 3. (986 aa)
	LOC103370596	C2 calcium dependent domain containing 5. (1066 aa)
	eps8	Epidermal growth factor receptor pathway substrate 8a. (728 aa)
	aif1l	Allograft inflammatory factor 1-like. (146 aa)
	LOC103365304	Integrin beta; Belongs to the integrin beta chain family. (784 aa)
	myo6	Myosin VIb; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Myosin family. (1241 aa)
	fam107a	Family with sequence similarity 107 member A. (166 aa)
	itgb1	Integrin beta; Belongs to the integrin beta chain family. (802 aa)
	EPS8L2	EPS8 like 2. (686 aa)
	ENSSPAP00000021246	Integrin_b_cyt domain-containing protein. (110 aa)

Your Current Organism:

Stegastes partitus

NCBI taxonomy Id: 144197
Other names: S. partitus, bicolor damselfish

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structured XML interaction data, according to the 'PSI-MI' data standard

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a flat-file format describing the coordinates and colors of nodes in the network

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... protein annotations:

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

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a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
AIF1	myo6	ENSSPAP00000030309	ENSSPAP00000025244	Allograft inflammatory factor 1.	Myosin VIb; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Myosin family.	0.406
ARHGEF2	LOC103356923	ENSSPAP00000027650	ENSSPAP00000007429	Rho/rac guanine nucleotide exchange factor (GEF) 2.	Rho guanine nucleotide exchange factor (GEF) 1a.	0.899
ENSSPAP00000000692	ENSSPAP00000000729	ENSSPAP00000000692	ENSSPAP00000000729	SEC7 domain-containing protein.	PH_9 domain-containing protein.	0.900
ENSSPAP00000000692	ENSSPAP00000018500	ENSSPAP00000000692	ENSSPAP00000018500	SEC7 domain-containing protein.	Pleckstrin and Sec7 domain containing a.	0.614
ENSSPAP00000000729	ENSSPAP00000000692	ENSSPAP00000000729	ENSSPAP00000000692	PH_9 domain-containing protein.	SEC7 domain-containing protein.	0.900
ENSSPAP00000000729	ENSSPAP00000018449	ENSSPAP00000000729	ENSSPAP00000018449	PH_9 domain-containing protein.	SEC7 domain-containing protein.	0.900
ENSSPAP00000018449	ENSSPAP00000000729	ENSSPAP00000018449	ENSSPAP00000000729	SEC7 domain-containing protein.	PH_9 domain-containing protein.	0.900
ENSSPAP00000018449	ENSSPAP00000018500	ENSSPAP00000018449	ENSSPAP00000018500	SEC7 domain-containing protein.	Pleckstrin and Sec7 domain containing a.	0.698
ENSSPAP00000018500	ENSSPAP00000000692	ENSSPAP00000018500	ENSSPAP00000000692	Pleckstrin and Sec7 domain containing a.	SEC7 domain-containing protein.	0.614
ENSSPAP00000018500	ENSSPAP00000018449	ENSSPAP00000018500	ENSSPAP00000018449	Pleckstrin and Sec7 domain containing a.	SEC7 domain-containing protein.	0.698
ENSSPAP00000021246	LOC103365304	ENSSPAP00000021246	ENSSPAP00000026648	Integrin_b_cyt domain-containing protein.	Integrin beta; Belongs to the integrin beta chain family.	0.911
ENSSPAP00000021246	LOC103366961	ENSSPAP00000021246	ENSSPAP00000021159	Integrin_b_cyt domain-containing protein.	Integrin beta.	0.956
ENSSPAP00000021246	itgb1	ENSSPAP00000021246	ENSSPAP00000025066	Integrin_b_cyt domain-containing protein.	Integrin beta; Belongs to the integrin beta chain family.	0.909
LOC103356923	ARHGEF2	ENSSPAP00000007429	ENSSPAP00000027650	Rho guanine nucleotide exchange factor (GEF) 1a.	Rho/rac guanine nucleotide exchange factor (GEF) 2.	0.899
LOC103365304	ENSSPAP00000021246	ENSSPAP00000026648	ENSSPAP00000021246	Integrin beta; Belongs to the integrin beta chain family.	Integrin_b_cyt domain-containing protein.	0.911
LOC103365304	LOC103366961	ENSSPAP00000026648	ENSSPAP00000021159	Integrin beta; Belongs to the integrin beta chain family.	Integrin beta.	0.910
LOC103365304	itgb1	ENSSPAP00000026648	ENSSPAP00000025066	Integrin beta; Belongs to the integrin beta chain family.	Integrin beta; Belongs to the integrin beta chain family.	0.933
LOC103366961	ENSSPAP00000021246	ENSSPAP00000021159	ENSSPAP00000021246	Integrin beta.	Integrin_b_cyt domain-containing protein.	0.956
LOC103366961	LOC103365304	ENSSPAP00000021159	ENSSPAP00000026648	Integrin beta.	Integrin beta; Belongs to the integrin beta chain family.	0.910
LOC103366961	itgb1	ENSSPAP00000021159	ENSSPAP00000025066	Integrin beta.	Integrin beta; Belongs to the integrin beta chain family.	0.909