(24 nodes) Centriolar satellite network (Stegastes partitus)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	pibf1	Progesterone immunomodulatory binding factor 1. (765 aa)
	LOC103358112	Ras association domain family member 8b. (437 aa)
	ENSSPAP00000029571	Uncharacterized protein. (308 aa)
	ccdc13	Coiled-coil domain containing 13. (516 aa)
	naa40	N(alpha)-acetyltransferase 40, NatD catalytic subunit, homolog (S. cerevisiae). (239 aa)
	ENSSPAP00000002368	DDE Tnp4 domain-containing protein. (264 aa)
	LOC103374699	Outer dense fiber of sperm tails 2a. (809 aa)
	LOC103357269	Ras association domain family member 7a. (448 aa)
	ENSSPAP00000008026	DDE Tnp4 domain-containing protein. (311 aa)
	ccdc61	Coiled-coil domain containing 61. (509 aa)
	LOC103360548	G_PROTEIN_RECEP_F1_2 domain-containing protein; Belongs to the G-protein coupled receptor 1 family. (407 aa)
	ENSSPAP00000004135	DDE Tnp4 domain-containing protein. (316 aa)
	ENSSPAP00000003951	DDE Tnp4 domain-containing protein. (247 aa)
	wdr13	WD repeat domain 13. (482 aa)
	cep131	Centrosomal protein 131. (1251 aa)
	pdzd2	PDZ domain containing 2. (2303 aa)
	cep290	Centrosomal protein 290. (2306 aa)
	ENSSPAP00000013563	Outer dense fiber of sperm tails 2b. (503 aa)
	rassf8	Ras association domain family member 8a. (406 aa)
	LOC103356696	Cytohesin 4b. (397 aa)
	c2cd3	C2 domain containing 3 centriole elongation regulator. (2050 aa)
	LOC103361896	Uncharacterized protein. (1092 aa)
	LOC103356350	G_PROTEIN_RECEP_F1_2 domain-containing protein; Belongs to the G-protein coupled receptor 1 family. (370 aa)
	knstrn	Uncharacterized protein. (216 aa)

Your Current Organism:

Stegastes partitus

NCBI taxonomy Id: 144197
Other names: S. partitus, bicolor damselfish

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structured XML interaction data, according to the 'PSI-MI' data standard

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node degree of proteins in your network (given the current score cut-off)

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a flat-file format describing the coordinates and colors of nodes in the network

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... protein annotations:

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

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a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
ENSSPAP00000013563	LOC103361896	ENSSPAP00000013563	ENSSPAP00000021297	Outer dense fiber of sperm tails 2b.	Uncharacterized protein.	0.412
ENSSPAP00000029571	LOC103361896	ENSSPAP00000029571	ENSSPAP00000021297	Uncharacterized protein.	Uncharacterized protein.	0.484
ENSSPAP00000029571	ccdc13	ENSSPAP00000029571	ENSSPAP00000024318	Uncharacterized protein.	Coiled-coil domain containing 13.	0.502
ENSSPAP00000029571	cep131	ENSSPAP00000029571	ENSSPAP00000018409	Uncharacterized protein.	Centrosomal protein 131.	0.562
ENSSPAP00000029571	cep290	ENSSPAP00000029571	ENSSPAP00000015844	Uncharacterized protein.	Centrosomal protein 290.	0.428
LOC103356350	LOC103360548	ENSSPAP00000021552	ENSSPAP00000004536	G_PROTEIN_RECEP_F1_2 domain-containing protein; Belongs to the G-protein coupled receptor 1 family.	G_PROTEIN_RECEP_F1_2 domain-containing protein; Belongs to the G-protein coupled receptor 1 family.	0.807
LOC103360548	LOC103356350	ENSSPAP00000004536	ENSSPAP00000021552	G_PROTEIN_RECEP_F1_2 domain-containing protein; Belongs to the G-protein coupled receptor 1 family.	G_PROTEIN_RECEP_F1_2 domain-containing protein; Belongs to the G-protein coupled receptor 1 family.	0.807
LOC103361896	ENSSPAP00000013563	ENSSPAP00000021297	ENSSPAP00000013563	Uncharacterized protein.	Outer dense fiber of sperm tails 2b.	0.412
LOC103361896	ENSSPAP00000029571	ENSSPAP00000021297	ENSSPAP00000029571	Uncharacterized protein.	Uncharacterized protein.	0.484
LOC103361896	LOC103374699	ENSSPAP00000021297	ENSSPAP00000010166	Uncharacterized protein.	Outer dense fiber of sperm tails 2a.	0.412
LOC103361896	wdr13	ENSSPAP00000021297	ENSSPAP00000021259	Uncharacterized protein.	WD repeat domain 13.	0.412
LOC103374699	LOC103361896	ENSSPAP00000010166	ENSSPAP00000021297	Outer dense fiber of sperm tails 2a.	Uncharacterized protein.	0.412
c2cd3	cep290	ENSSPAP00000007946	ENSSPAP00000015844	C2 domain containing 3 centriole elongation regulator.	Centrosomal protein 290.	0.636
ccdc13	ENSSPAP00000029571	ENSSPAP00000024318	ENSSPAP00000029571	Coiled-coil domain containing 13.	Uncharacterized protein.	0.502
ccdc13	cep131	ENSSPAP00000024318	ENSSPAP00000018409	Coiled-coil domain containing 13.	Centrosomal protein 131.	0.506
cep131	ENSSPAP00000029571	ENSSPAP00000018409	ENSSPAP00000029571	Centrosomal protein 131.	Uncharacterized protein.	0.562
cep131	ccdc13	ENSSPAP00000018409	ENSSPAP00000024318	Centrosomal protein 131.	Coiled-coil domain containing 13.	0.506
cep131	cep290	ENSSPAP00000018409	ENSSPAP00000015844	Centrosomal protein 131.	Centrosomal protein 290.	0.691
cep131	pdzd2	ENSSPAP00000018409	ENSSPAP00000016269	Centrosomal protein 131.	PDZ domain containing 2.	0.470
cep290	ENSSPAP00000029571	ENSSPAP00000015844	ENSSPAP00000029571	Centrosomal protein 290.	Uncharacterized protein.	0.428