(7 nodes) Basal cortex network (Stegastes partitus)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	ENSSPAP00000000280	Uncharacterized protein. (394 aa)
	ENSSPAP00000000292	PH domain-containing protein. (101 aa)
	LOC103354549	Pleckstrin homology-like domain, family B, member 2b. (1161 aa)
	phldb1	Pleckstrin homology-like domain, family B, member 1b. (1482 aa)
	LOC103359647	Pleckstrin homology-like domain, family B, member 1a. (1256 aa)
	ENSSPAP00000016175	PH domain-containing protein. (330 aa)
	ENSSPAP00000021125	PH domain-containing protein. (101 aa)

Your Current Organism:

Stegastes partitus

NCBI taxonomy Id: 144197
Other names: S. partitus, bicolor damselfish

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structured XML interaction data, according to the 'PSI-MI' data standard

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

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a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
ENSSPAP00000000280	ENSSPAP00000000292	ENSSPAP00000000280	ENSSPAP00000000292	Uncharacterized protein.	PH domain-containing protein.	0.892
ENSSPAP00000000280	ENSSPAP00000016175	ENSSPAP00000000280	ENSSPAP00000016175	Uncharacterized protein.	PH domain-containing protein.	0.607
ENSSPAP00000000280	ENSSPAP00000021125	ENSSPAP00000000280	ENSSPAP00000021125	Uncharacterized protein.	PH domain-containing protein.	0.883
ENSSPAP00000000292	ENSSPAP00000000280	ENSSPAP00000000292	ENSSPAP00000000280	PH domain-containing protein.	Uncharacterized protein.	0.892
ENSSPAP00000000292	LOC103354549	ENSSPAP00000000292	ENSSPAP00000010224	PH domain-containing protein.	Pleckstrin homology-like domain, family B, member 2b.	0.899
ENSSPAP00000000292	LOC103359647	ENSSPAP00000000292	ENSSPAP00000021162	PH domain-containing protein.	Pleckstrin homology-like domain, family B, member 1a.	0.843
ENSSPAP00000016175	ENSSPAP00000000280	ENSSPAP00000016175	ENSSPAP00000000280	PH domain-containing protein.	Uncharacterized protein.	0.607
ENSSPAP00000016175	LOC103354549	ENSSPAP00000016175	ENSSPAP00000010224	PH domain-containing protein.	Pleckstrin homology-like domain, family B, member 2b.	0.538
ENSSPAP00000021125	ENSSPAP00000000280	ENSSPAP00000021125	ENSSPAP00000000280	PH domain-containing protein.	Uncharacterized protein.	0.883
ENSSPAP00000021125	LOC103354549	ENSSPAP00000021125	ENSSPAP00000010224	PH domain-containing protein.	Pleckstrin homology-like domain, family B, member 2b.	0.882
ENSSPAP00000021125	LOC103359647	ENSSPAP00000021125	ENSSPAP00000021162	PH domain-containing protein.	Pleckstrin homology-like domain, family B, member 1a.	0.859
LOC103354549	ENSSPAP00000000292	ENSSPAP00000010224	ENSSPAP00000000292	Pleckstrin homology-like domain, family B, member 2b.	PH domain-containing protein.	0.899
LOC103354549	ENSSPAP00000016175	ENSSPAP00000010224	ENSSPAP00000016175	Pleckstrin homology-like domain, family B, member 2b.	PH domain-containing protein.	0.538
LOC103354549	ENSSPAP00000021125	ENSSPAP00000010224	ENSSPAP00000021125	Pleckstrin homology-like domain, family B, member 2b.	PH domain-containing protein.	0.882
LOC103359647	ENSSPAP00000000292	ENSSPAP00000021162	ENSSPAP00000000292	Pleckstrin homology-like domain, family B, member 1a.	PH domain-containing protein.	0.843
LOC103359647	ENSSPAP00000021125	ENSSPAP00000021162	ENSSPAP00000021125	Pleckstrin homology-like domain, family B, member 1a.	PH domain-containing protein.	0.859