(17 nodes) CAP Gly-rich domain network (Stegastes partitus)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	LOC103357298	Cylindromatosis (turban tumor syndrome), like; Belongs to the peptidase C19 family. (773 aa)
	ENSSPAP00000031354	Uncharacterized protein. (338 aa)
	LOC103364794	Dynactin 1a. (1260 aa)
	CLIP4	CAP-Gly domain containing linker protein family member 4. (454 aa)
	kif13b	Uncharacterized protein; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Kinesin family. (1779 aa)
	cyld	Cylindromatosis (turban tumor syndrome), a; Belongs to the peptidase C19 family. (917 aa)
	clip2	CAP-GLY domain containing linker protein 2. (1014 aa)
	ENSSPAP00000016542	Si:ch211-175f12.2. (194 aa)
	LOC103355780	Uncharacterized protein. (897 aa)
	ENSSPAP00000015548	Uncharacterized protein. (348 aa)
	cep350	Centrosomal protein 350. (3159 aa)
	tbcb	Tubulin folding cofactor B. (246 aa)
	tbce	Tubulin folding cofactor E. (520 aa)
	LOC103358451	Kinesin family member 13Ba; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Kinesin family. (1800 aa)
	LOC103358823	Cylindromatosis (turban tumor syndrome), b. (681 aa)
	clip3	CAP-GLY domain containing linker protein 3. (653 aa)
	kif13a	Kinesin family member 13A; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Kinesin family. (1779 aa)

Your Current Organism:

Stegastes partitus

NCBI taxonomy Id: 144197
Other names: S. partitus, bicolor damselfish

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structured XML interaction data, according to the 'PSI-MI' data standard

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

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a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
CLIP4	LOC103355780	ENSSPAP00000028001	ENSSPAP00000016465	CAP-Gly domain containing linker protein family member 4.	Uncharacterized protein.	0.672
CLIP4	LOC103357298	ENSSPAP00000028001	ENSSPAP00000011276	CAP-Gly domain containing linker protein family member 4.	Cylindromatosis (turban tumor syndrome), like; Belongs to the peptidase C19 family.	0.701
CLIP4	LOC103358823	ENSSPAP00000028001	ENSSPAP00000002372	CAP-Gly domain containing linker protein family member 4.	Cylindromatosis (turban tumor syndrome), b.	0.701
CLIP4	cyld	ENSSPAP00000028001	ENSSPAP00000026507	CAP-Gly domain containing linker protein family member 4.	Cylindromatosis (turban tumor syndrome), a; Belongs to the peptidase C19 family.	0.701
ENSSPAP00000015548	LOC103355780	ENSSPAP00000015548	ENSSPAP00000016465	Uncharacterized protein.	Uncharacterized protein.	0.472
ENSSPAP00000015548	LOC103357298	ENSSPAP00000015548	ENSSPAP00000011276	Uncharacterized protein.	Cylindromatosis (turban tumor syndrome), like; Belongs to the peptidase C19 family.	0.472
ENSSPAP00000015548	LOC103358823	ENSSPAP00000015548	ENSSPAP00000002372	Uncharacterized protein.	Cylindromatosis (turban tumor syndrome), b.	0.472
ENSSPAP00000015548	LOC103364794	ENSSPAP00000015548	ENSSPAP00000029249	Uncharacterized protein.	Dynactin 1a.	0.683
ENSSPAP00000015548	cyld	ENSSPAP00000015548	ENSSPAP00000026507	Uncharacterized protein.	Cylindromatosis (turban tumor syndrome), a; Belongs to the peptidase C19 family.	0.472
ENSSPAP00000016542	LOC103355780	ENSSPAP00000016542	ENSSPAP00000016465	Si:ch211-175f12.2.	Uncharacterized protein.	0.472
ENSSPAP00000016542	LOC103357298	ENSSPAP00000016542	ENSSPAP00000011276	Si:ch211-175f12.2.	Cylindromatosis (turban tumor syndrome), like; Belongs to the peptidase C19 family.	0.472
ENSSPAP00000016542	LOC103358823	ENSSPAP00000016542	ENSSPAP00000002372	Si:ch211-175f12.2.	Cylindromatosis (turban tumor syndrome), b.	0.472
ENSSPAP00000016542	cyld	ENSSPAP00000016542	ENSSPAP00000026507	Si:ch211-175f12.2.	Cylindromatosis (turban tumor syndrome), a; Belongs to the peptidase C19 family.	0.472
ENSSPAP00000031354	LOC103355780	ENSSPAP00000031354	ENSSPAP00000016465	Uncharacterized protein.	Uncharacterized protein.	0.472
ENSSPAP00000031354	LOC103357298	ENSSPAP00000031354	ENSSPAP00000011276	Uncharacterized protein.	Cylindromatosis (turban tumor syndrome), like; Belongs to the peptidase C19 family.	0.472
ENSSPAP00000031354	LOC103358823	ENSSPAP00000031354	ENSSPAP00000002372	Uncharacterized protein.	Cylindromatosis (turban tumor syndrome), b.	0.472
ENSSPAP00000031354	LOC103364794	ENSSPAP00000031354	ENSSPAP00000029249	Uncharacterized protein.	Dynactin 1a.	0.683
ENSSPAP00000031354	cyld	ENSSPAP00000031354	ENSSPAP00000026507	Uncharacterized protein.	Cylindromatosis (turban tumor syndrome), a; Belongs to the peptidase C19 family.	0.472
LOC103355780	CLIP4	ENSSPAP00000016465	ENSSPAP00000028001	Uncharacterized protein.	CAP-Gly domain containing linker protein family member 4.	0.672
LOC103355780	ENSSPAP00000015548	ENSSPAP00000016465	ENSSPAP00000015548	Uncharacterized protein.	Uncharacterized protein.	0.472