STRINGSTRING
adgrv1 adgrv1 LOC103368862 LOC103368862 LOC103369986 LOC103369986 slc8a1 slc8a1 ENSSPAP00000003179 ENSSPAP00000003179 frem3 frem3 LOC103363370 LOC103363370 LOC103363427 LOC103363427 LOC103369072 LOC103369072 itgb4 itgb4 LOC103372019 LOC103372019 LOC103358178 LOC103358178
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
adgrv1Adhesion G protein-coupled receptor V1; Belongs to the G-protein coupled receptor 2 family. (6196 aa)
LOC103368862Solute carrier family 8 member 2a; Belongs to the Ca(2+):cation antiporter (CaCA) (TC 2.A.19) family. (919 aa)
LOC103369986Solute carrier family 8 member 1a; Belongs to the Ca(2+):cation antiporter (CaCA) (TC 2.A.19) family. (956 aa)
slc8a1Solute carrier family 8 member 1b; Belongs to the Ca(2+):cation antiporter (CaCA) (TC 2.A.19) family. (930 aa)
ENSSPAP00000003179Solute carrier family 8 member 3; Belongs to the Ca(2+):cation antiporter (CaCA) (TC 2.A.19) family. (635 aa)
frem3Fras1 related extracellular matrix 3. (3142 aa)
LOC103363370Solute carrier family 8 member 4a; Belongs to the Ca(2+):cation antiporter (CaCA) (TC 2.A.19) family. (929 aa)
LOC103363427FRAS1 related extracellular matrix 2b. (3114 aa)
LOC103369072FRAS1 related extracellular matrix 2a. (3122 aa)
itgb4Integrin beta. (1992 aa)
LOC103372019Fraser extracellular matrix complex subunit 1. (3109 aa)
LOC103358178Uncharacterized protein; Belongs to the Ca(2+):cation antiporter (CaCA) (TC 2.A.19) family. (876 aa)
Your Current Organism:
Stegastes partitus
NCBI taxonomy Id: 144197
Other names: S. partitus, bicolor damselfish
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