STRINGSTRING
man2a2 man2a2 ydjc ydjc man2a1 man2a1 man2b2 man2b2 man2b1 man2b1
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
man2a2Alpha-mannosidase. (1152 aa)
ydjcYdjC chitooligosaccharide deacetylase homolog. (310 aa)
man2a1Alpha-mannosidase. (1016 aa)
man2b2Alpha-mannosidase. (1015 aa)
man2b1Alpha-mannosidase. (1000 aa)
Your Current Organism:
Stegastes partitus
NCBI taxonomy Id: 144197
Other names: S. partitus, bicolor damselfish
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