(39 nodes) Transforming growth factor beta, conserved site network (Stegastes partitus)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	INHBC	Inhibin subunit beta C. (383 aa)
	LOC103373865	TGF_BETA_2 domain-containing protein. (401 aa)
	bmp3	Bone morphogenetic protein 3; Belongs to the TGF-beta family. (462 aa)
	LOC103356816	Inhibin subunit beta B. (403 aa)
	gdf3	Growth differentiation factor 3. (377 aa)
	gdf9	Growth differentiation factor 9. (438 aa)
	gdf6	Growth differentiation factor 6a. (444 aa)
	LOC103371424	Bone morphogenetic protein 8a. (415 aa)
	bmp4	Bone morphogenetic protein 4. (403 aa)
	LOC103370837	Bone morphogenetic protein 7b. (427 aa)
	INHBB	TGF_BETA_2 domain-containing protein. (385 aa)
	gdf15	TGF_BETA_2 domain-containing protein. (372 aa)
	mstn	Myostatin b. (376 aa)
	ENSSPAP00000001621	TGF_BETA_2 domain-containing protein. (112 aa)
	LOC103357712	TGF_BETA_2 domain-containing protein. (529 aa)
	LOC103359380	Growth differentiation factor 11. (388 aa)
	bmp10	Bone morphogenetic protein 10. (468 aa)
	LOC103374786	Lefty1. (351 aa)
	bmp2	Bone morphogenetic protein 2b. (416 aa)
	LOC103375337	Southpaw. (467 aa)
	LOC103364526	Bone morphogenetic protein 16. (476 aa)
	LOC103375549	TGF_BETA_2 domain-containing protein. (378 aa)
	gdf10	Growth differentiation factor 10b. (439 aa)
	gdf2	Growth differentiation factor 2. (420 aa)
	gdf5	Growth differentiation factor 5. (462 aa)
	LOC103361652	Bone morphogenetic protein 10, like. (459 aa)
	LOC103374198	Transforming growth factor beta; Belongs to the TGF-beta family. (422 aa)
	ENSSPAP00000010074	Growth differentiation factor 6b. (400 aa)
	LOC103366771	Inhibin subunit beta Aa. (443 aa)
	bmp6	Bone morphogenetic protein 6. (429 aa)
	tgfb3	Transforming growth factor beta; Belongs to the TGF-beta family. (405 aa)
	LOC103375280	Transforming growth factor beta; Belongs to the TGF-beta family. (333 aa)
	bmp5	Bone morphogenetic protein 5. (456 aa)
	bmp7	Bone morphogenetic protein 7a. (425 aa)
	LOC103373263	Transforming growth factor beta; Belongs to the TGF-beta family. (384 aa)
	LOC103366962	TGF_BETA_2 domain-containing protein. (355 aa)
	ENSSPAP00000020948	TGF_BETA_2 domain-containing protein. (115 aa)
	LOC103363570	Transforming growth factor beta; Belongs to the TGF-beta family. (408 aa)
	LOC103353062	Anti-dorsalizing morphogenic protein. (381 aa)

Your Current Organism:

Stegastes partitus

NCBI taxonomy Id: 144197
Other names: S. partitus, bicolor damselfish

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

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a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
ENSSPAP00000001621	ENSSPAP00000020948	ENSSPAP00000001621	ENSSPAP00000020948	TGF_BETA_2 domain-containing protein.	TGF_BETA_2 domain-containing protein.	0.823
ENSSPAP00000001621	INHBC	ENSSPAP00000001621	ENSSPAP00000030111	TGF_BETA_2 domain-containing protein.	Inhibin subunit beta C.	0.898
ENSSPAP00000001621	LOC103364526	ENSSPAP00000001621	ENSSPAP00000014913	TGF_BETA_2 domain-containing protein.	Bone morphogenetic protein 16.	0.542
ENSSPAP00000001621	LOC103374786	ENSSPAP00000001621	ENSSPAP00000015693	TGF_BETA_2 domain-containing protein.	Lefty1.	0.934
ENSSPAP00000001621	LOC103375337	ENSSPAP00000001621	ENSSPAP00000014935	TGF_BETA_2 domain-containing protein.	Southpaw.	0.898
ENSSPAP00000001621	bmp2	ENSSPAP00000001621	ENSSPAP00000015145	TGF_BETA_2 domain-containing protein.	Bone morphogenetic protein 2b.	0.542
ENSSPAP00000001621	bmp4	ENSSPAP00000001621	ENSSPAP00000026584	TGF_BETA_2 domain-containing protein.	Bone morphogenetic protein 4.	0.542
ENSSPAP00000001621	gdf3	ENSSPAP00000001621	ENSSPAP00000016590	TGF_BETA_2 domain-containing protein.	Growth differentiation factor 3.	0.742
ENSSPAP00000010074	gdf6	ENSSPAP00000010074	ENSSPAP00000025738	Growth differentiation factor 6b.	Growth differentiation factor 6a.	0.900
ENSSPAP00000020948	ENSSPAP00000001621	ENSSPAP00000020948	ENSSPAP00000001621	TGF_BETA_2 domain-containing protein.	TGF_BETA_2 domain-containing protein.	0.823
ENSSPAP00000020948	INHBC	ENSSPAP00000020948	ENSSPAP00000030111	TGF_BETA_2 domain-containing protein.	Inhibin subunit beta C.	0.828
ENSSPAP00000020948	LOC103364526	ENSSPAP00000020948	ENSSPAP00000014913	TGF_BETA_2 domain-containing protein.	Bone morphogenetic protein 16.	0.542
ENSSPAP00000020948	LOC103374786	ENSSPAP00000020948	ENSSPAP00000015693	TGF_BETA_2 domain-containing protein.	Lefty1.	0.890
ENSSPAP00000020948	LOC103375337	ENSSPAP00000020948	ENSSPAP00000014935	TGF_BETA_2 domain-containing protein.	Southpaw.	0.830
ENSSPAP00000020948	bmp2	ENSSPAP00000020948	ENSSPAP00000015145	TGF_BETA_2 domain-containing protein.	Bone morphogenetic protein 2b.	0.542
ENSSPAP00000020948	bmp4	ENSSPAP00000020948	ENSSPAP00000026584	TGF_BETA_2 domain-containing protein.	Bone morphogenetic protein 4.	0.575
ENSSPAP00000020948	gdf3	ENSSPAP00000020948	ENSSPAP00000016590	TGF_BETA_2 domain-containing protein.	Growth differentiation factor 3.	0.742
INHBB	INHBC	ENSSPAP00000026735	ENSSPAP00000030111	TGF_BETA_2 domain-containing protein.	Inhibin subunit beta C.	0.907
INHBB	LOC103356816	ENSSPAP00000026735	ENSSPAP00000016888	TGF_BETA_2 domain-containing protein.	Inhibin subunit beta B.	0.902
INHBB	LOC103363570	ENSSPAP00000026735	ENSSPAP00000019283	TGF_BETA_2 domain-containing protein.	Transforming growth factor beta; Belongs to the TGF-beta family.	0.836