45 items (Stegastes partitus) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	LOC103371190	Angiopoietin 4. (524 aa)
	LOC103369125	Angiopoietin-like 4. (470 aa)
	tnn	Tenascin N. (1121 aa)
	LOC103366616	Si:ch211-157b11.8. (317 aa)
	cntnap2	Contactin associated protein like 2b. (1212 aa)
	LOC103355524	Fibrinogen C-terminal domain-containing protein. (445 aa)
	angptl7	Angiopoietin-like 7. (340 aa)
	ENSSPAP00000004345	Fibrinogen C-terminal domain-containing protein. (290 aa)
	LOC103354475	Si:ch211-287a12.9. (361 aa)
	LOC103368764	Fibrinogen C-terminal domain-containing protein. (471 aa)
	LOC103364417	Uncharacterized protein. (1188 aa)
	LOC103365434	Angiopoietin-like 1b. (491 aa)
	LOC103375704	Fibrinogen C-terminal domain-containing protein. (268 aa)
	fibcd1	Fibrinogen C-terminal domain-containing protein. (448 aa)
	LOC103374638	Zgc:194887. (277 aa)
	LOC103370624	Uncharacterized protein. (1669 aa)
	angpt2	Angiopoietin 2a. (493 aa)
	LOC103361136	Si:zfos-2330d3.7. (221 aa)
	LOC103360327	Uncharacterized protein. (1294 aa)
	angptl6	Angiopoietin-like 6. (491 aa)
	ENSSPAP00000030349	Fibrinogen C-terminal domain-containing protein. (370 aa)
	ENSSPAP00000030267	Fibrinogen C-terminal domain-containing protein. (2027 aa)
	ENSSPAP00000029527	Fibrinogen C-terminal domain-containing protein. (192 aa)
	LOC103356464	Tenascin C. (1729 aa)
	LOC103369909	Si:ch211-203k16.3. (341 aa)
	LOC103354876	Zgc:153219. (299 aa)
	angptl3	Angiopoietin-like 3. (473 aa)
	fgg	Fibrinogen gamma chain. (432 aa)
	LOC103369860	Fibrinogen C domain containing 1. (438 aa)
	LOC103363696	Contactin associated protein-like 5a. (1136 aa)
	LOC103374965	Zmp:0000000846. (2380 aa)
	fgl1	Fibrinogen C-terminal domain-containing protein. (318 aa)
	LOC103369231	Fibrinogen C-terminal domain-containing protein. (245 aa)
	angptl1	Angiopoietin-like 1a. (488 aa)
	LOC103362445	Fibrinogen C-terminal domain-containing protein. (518 aa)
	LOC103364060	Angiopoietin 2b. (504 aa)
	fgl2	Fibrinogen-like 2a. (607 aa)
	ANGPTL2	Angiopoietin like 2. (514 aa)
	LOC103365113	Fibrinogen C-terminal domain-containing protein. (258 aa)
	cntnap1	Contactin associated protein 1. (1252 aa)
	fgb	Fibrinogen beta chain. (494 aa)
	angpt1	Angiopoietin 1. (519 aa)
	LOC103361715	Uncharacterized protein. (1226 aa)
	ENSSPAP00000011000	Angiopoietin-like 5. (245 aa)
	LOC103355105	Angiopoietin-like 5. (378 aa)

Your Current Organism:

Stegastes partitus

NCBI taxonomy Id: 144197
Other names: S. partitus, bicolor damselfish

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structured XML interaction data, according to the 'PSI-MI' data standard

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node degree of proteins in your network (given the current score cut-off)

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a flat-file format describing the coordinates and colors of nodes in the network

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... protein annotations:

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

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a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
ANGPTL2	LOC103369125	ENSSPAP00000016963	ENSSPAP00000000024	Angiopoietin like 2.	Angiopoietin-like 4.	0.494
ANGPTL2	angpt2	ENSSPAP00000016963	ENSSPAP00000008671	Angiopoietin like 2.	Angiopoietin 2a.	0.421
ANGPTL2	angptl7	ENSSPAP00000016963	ENSSPAP00000003964	Angiopoietin like 2.	Angiopoietin-like 7.	0.411
ANGPTL2	tnn	ENSSPAP00000016963	ENSSPAP00000000957	Angiopoietin like 2.	Tenascin N.	0.489
ENSSPAP00000004345	LOC103364060	ENSSPAP00000004345	ENSSPAP00000017656	Fibrinogen C-terminal domain-containing protein.	Angiopoietin 2b.	0.411
ENSSPAP00000004345	angpt2	ENSSPAP00000004345	ENSSPAP00000008671	Fibrinogen C-terminal domain-containing protein.	Angiopoietin 2a.	0.407
ENSSPAP00000004345	angptl6	ENSSPAP00000004345	ENSSPAP00000030455	Fibrinogen C-terminal domain-containing protein.	Angiopoietin-like 6.	0.418
ENSSPAP00000004345	angptl7	ENSSPAP00000004345	ENSSPAP00000003964	Fibrinogen C-terminal domain-containing protein.	Angiopoietin-like 7.	0.405
ENSSPAP00000004345	fgg	ENSSPAP00000004345	ENSSPAP00000026159	Fibrinogen C-terminal domain-containing protein.	Fibrinogen gamma chain.	0.706
ENSSPAP00000011000	LOC103364060	ENSSPAP00000011000	ENSSPAP00000017656	Angiopoietin-like 5.	Angiopoietin 2b.	0.408
ENSSPAP00000011000	angptl7	ENSSPAP00000011000	ENSSPAP00000003964	Angiopoietin-like 5.	Angiopoietin-like 7.	0.461
ENSSPAP00000011000	tnn	ENSSPAP00000011000	ENSSPAP00000000957	Angiopoietin-like 5.	Tenascin N.	0.489
ENSSPAP00000029527	LOC103364060	ENSSPAP00000029527	ENSSPAP00000017656	Fibrinogen C-terminal domain-containing protein.	Angiopoietin 2b.	0.405
ENSSPAP00000029527	LOC103374638	ENSSPAP00000029527	ENSSPAP00000007771	Fibrinogen C-terminal domain-containing protein.	Zgc:194887.	0.408
ENSSPAP00000029527	angpt2	ENSSPAP00000029527	ENSSPAP00000008671	Fibrinogen C-terminal domain-containing protein.	Angiopoietin 2a.	0.401
LOC103354475	LOC103364060	ENSSPAP00000005426	ENSSPAP00000017656	Si:ch211-287a12.9.	Angiopoietin 2b.	0.415
LOC103354475	LOC103371190	ENSSPAP00000005426	ENSSPAP00000009963	Si:ch211-287a12.9.	Angiopoietin 4.	0.406
LOC103354475	LOC103374638	ENSSPAP00000005426	ENSSPAP00000007771	Si:ch211-287a12.9.	Zgc:194887.	0.428
LOC103354475	angpt2	ENSSPAP00000005426	ENSSPAP00000008671	Si:ch211-287a12.9.	Angiopoietin 2a.	0.409
LOC103355105	angptl7	ENSSPAP00000010983	ENSSPAP00000003964	Angiopoietin-like 5.	Angiopoietin-like 7.	0.461