16 items (Stegastes partitus) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	LOC103356397	Cugbp, Elav-like family member 3a. (433 aa)
	LOC103356074	Si:dkey-238f9.1. (132 aa)
	celf5	Cugbp, Elav-like family member 5a. (451 aa)
	lnpep	Leucyl/cystinyl aminopeptidase. (1035 aa)
	LOC103364248	Uncharacterized protein. (137 aa)
	ENSSPAP00000026627	Ig-like domain-containing protein; Belongs to the MHC class I family. (371 aa)
	ENSSPAP00000027119	MHC_I-like_Ag-recog domain-containing protein. (276 aa)
	LOC103365291	Cugbp, Elav-like family member 3b. (495 aa)
	celf4	CUGBP, Elav-like family member 4. (427 aa)
	LOC103357398	Si:dkey-205h23.2. (436 aa)
	LOC103374203	Ig-like domain-containing protein; Belongs to the MHC class I family. (283 aa)
	ENSSPAP00000011915	Ig-like domain-containing protein; Belongs to the MHC class I family. (281 aa)
	LOC103355116	Beta-2-microglobulin; Component of the class I major histocompatibility complex (MHC). Involved in the presentation of peptide antigens to the immune system. (116 aa)
	ENSSPAP00000010428	RRM domain-containing protein. (131 aa)
	ENSSPAP00000008932	Ig-like domain-containing protein; Belongs to the MHC class I family. (298 aa)
	LOC103356677	Beta-2-microglobulin; Component of the class I major histocompatibility complex (MHC). Involved in the presentation of peptide antigens to the immune system. (141 aa)

Your Current Organism:

Stegastes partitus

NCBI taxonomy Id: 144197
Other names: S. partitus, bicolor damselfish

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structured XML interaction data, according to the 'PSI-MI' data standard

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node degree of proteins in your network (given the current score cut-off)

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a flat-file format describing the coordinates and colors of nodes in the network

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MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

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a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
ENSSPAP00000008932	ENSSPAP00000027119	ENSSPAP00000008932	ENSSPAP00000027119	Ig-like domain-containing protein; Belongs to the MHC class I family.	MHC_I-like_Ag-recog domain-containing protein.	0.734
ENSSPAP00000008932	LOC103355116	ENSSPAP00000008932	ENSSPAP00000011349	Ig-like domain-containing protein; Belongs to the MHC class I family.	Beta-2-microglobulin; Component of the class I major histocompatibility complex (MHC). Involved in the presentation of peptide antigens to the immune system.	0.951
ENSSPAP00000008932	LOC103356677	ENSSPAP00000008932	ENSSPAP00000005751	Ig-like domain-containing protein; Belongs to the MHC class I family.	Beta-2-microglobulin; Component of the class I major histocompatibility complex (MHC). Involved in the presentation of peptide antigens to the immune system.	0.951
ENSSPAP00000008932	LOC103374203	ENSSPAP00000008932	ENSSPAP00000014218	Ig-like domain-containing protein; Belongs to the MHC class I family.	Ig-like domain-containing protein; Belongs to the MHC class I family.	0.767
ENSSPAP00000008932	lnpep	ENSSPAP00000008932	ENSSPAP00000029117	Ig-like domain-containing protein; Belongs to the MHC class I family.	Leucyl/cystinyl aminopeptidase.	0.501
ENSSPAP00000011915	ENSSPAP00000027119	ENSSPAP00000011915	ENSSPAP00000027119	Ig-like domain-containing protein; Belongs to the MHC class I family.	MHC_I-like_Ag-recog domain-containing protein.	0.734
ENSSPAP00000011915	LOC103355116	ENSSPAP00000011915	ENSSPAP00000011349	Ig-like domain-containing protein; Belongs to the MHC class I family.	Beta-2-microglobulin; Component of the class I major histocompatibility complex (MHC). Involved in the presentation of peptide antigens to the immune system.	0.869
ENSSPAP00000011915	LOC103356677	ENSSPAP00000011915	ENSSPAP00000005751	Ig-like domain-containing protein; Belongs to the MHC class I family.	Beta-2-microglobulin; Component of the class I major histocompatibility complex (MHC). Involved in the presentation of peptide antigens to the immune system.	0.869
ENSSPAP00000011915	LOC103374203	ENSSPAP00000011915	ENSSPAP00000014218	Ig-like domain-containing protein; Belongs to the MHC class I family.	Ig-like domain-containing protein; Belongs to the MHC class I family.	0.775
ENSSPAP00000011915	lnpep	ENSSPAP00000011915	ENSSPAP00000029117	Ig-like domain-containing protein; Belongs to the MHC class I family.	Leucyl/cystinyl aminopeptidase.	0.501
ENSSPAP00000026627	ENSSPAP00000027119	ENSSPAP00000026627	ENSSPAP00000027119	Ig-like domain-containing protein; Belongs to the MHC class I family.	MHC_I-like_Ag-recog domain-containing protein.	0.751
ENSSPAP00000026627	LOC103355116	ENSSPAP00000026627	ENSSPAP00000011349	Ig-like domain-containing protein; Belongs to the MHC class I family.	Beta-2-microglobulin; Component of the class I major histocompatibility complex (MHC). Involved in the presentation of peptide antigens to the immune system.	0.951
ENSSPAP00000026627	LOC103356677	ENSSPAP00000026627	ENSSPAP00000005751	Ig-like domain-containing protein; Belongs to the MHC class I family.	Beta-2-microglobulin; Component of the class I major histocompatibility complex (MHC). Involved in the presentation of peptide antigens to the immune system.	0.951
ENSSPAP00000026627	LOC103374203	ENSSPAP00000026627	ENSSPAP00000014218	Ig-like domain-containing protein; Belongs to the MHC class I family.	Ig-like domain-containing protein; Belongs to the MHC class I family.	0.764
ENSSPAP00000026627	lnpep	ENSSPAP00000026627	ENSSPAP00000029117	Ig-like domain-containing protein; Belongs to the MHC class I family.	Leucyl/cystinyl aminopeptidase.	0.501
ENSSPAP00000027119	ENSSPAP00000008932	ENSSPAP00000027119	ENSSPAP00000008932	MHC_I-like_Ag-recog domain-containing protein.	Ig-like domain-containing protein; Belongs to the MHC class I family.	0.734
ENSSPAP00000027119	ENSSPAP00000011915	ENSSPAP00000027119	ENSSPAP00000011915	MHC_I-like_Ag-recog domain-containing protein.	Ig-like domain-containing protein; Belongs to the MHC class I family.	0.734
ENSSPAP00000027119	ENSSPAP00000026627	ENSSPAP00000027119	ENSSPAP00000026627	MHC_I-like_Ag-recog domain-containing protein.	Ig-like domain-containing protein; Belongs to the MHC class I family.	0.751
ENSSPAP00000027119	LOC103355116	ENSSPAP00000027119	ENSSPAP00000011349	MHC_I-like_Ag-recog domain-containing protein.	Beta-2-microglobulin; Component of the class I major histocompatibility complex (MHC). Involved in the presentation of peptide antigens to the immune system.	0.918
ENSSPAP00000027119	LOC103356677	ENSSPAP00000027119	ENSSPAP00000005751	MHC_I-like_Ag-recog domain-containing protein.	Beta-2-microglobulin; Component of the class I major histocompatibility complex (MHC). Involved in the presentation of peptide antigens to the immune system.	0.916