142 items (Stegastes partitus) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	ENSSPAP00000026054	Uncharacterized protein. (272 aa)
	ENSSPAP00000005805	Ig-like domain-containing protein. (138 aa)
	LOC103363354	Uncharacterized protein. (856 aa)
	LOC103363357	Uncharacterized protein. (648 aa)
	ENSSPAP00000005980	Uncharacterized protein. (360 aa)
	ENSSPAP00000006000	Uncharacterized protein. (405 aa)
	ENSSPAP00000006047	SH2 domain-containing protein. (195 aa)
	ENSSPAP00000006865	Uncharacterized protein. (234 aa)
	ENSSPAP00000007549	Ig-like domain-containing protein. (126 aa)
	LOC103374638	Zgc:194887. (277 aa)
	ENSSPAP00000007893	Uncharacterized protein. (374 aa)
	ENSSPAP00000012347	Uncharacterized protein. (244 aa)
	ENSSPAP00000012327	Uncharacterized protein. (265 aa)
	epcam	Epithelial cell adhesion molecule. (306 aa)
	ENSSPAP00000011870	IGv domain-containing protein. (304 aa)
	itgb2	Integrin beta. (824 aa)
	angpt2	Angiopoietin 2a. (493 aa)
	itgav	Integrin, alpha V; Belongs to the integrin alpha chain family. (750 aa)
	LOC103360030	Uncharacterized protein. (295 aa)
	LOC103357265	HRas proto-oncogene, GTPase a. (247 aa)
	ENSSPAP00000009658	Ig-like domain-containing protein. (118 aa)
	LOC103371190	Angiopoietin 4. (524 aa)
	glg1	Golgi glycoprotein 1b. (1086 aa)
	ENSSPAP00000011124	Ig-like domain-containing protein. (105 aa)
	ENSSPAP00000011343	Ig-like domain-containing protein. (328 aa)
	itga4	Integrin alpha 4; Belongs to the integrin alpha chain family. (957 aa)
	LOC103361172	Ig-like domain-containing protein. (337 aa)
	ENSSPAP00000011446	Uncharacterized protein. (347 aa)
	ENSSPAP00000011556	Uncharacterized protein. (336 aa)
	ENSSPAP00000011602	Ig-like domain-containing protein. (186 aa)
	LOC103361188	Uncharacterized protein. (339 aa)
	LOC103361177	Uncharacterized protein. (381 aa)
	ENSSPAP00000011862	Uncharacterized protein. (263 aa)
	cd48	Ig-like domain-containing protein. (296 aa)
	pros1	Protein S. (679 aa)
	gas6	Uncharacterized protein. (650 aa)
	ENSSPAP00000020470	Fibronectin type-III domain-containing protein. (106 aa)
	ENSSPAP00000020448	Uncharacterized protein. (167 aa)
	ENSSPAP00000019734	Ig-like domain-containing protein. (111 aa)
	cd44	CD44 molecule (Indian blood group) b. (412 aa)
	LOC103362436	Endothelial cell adhesion molecule b. (404 aa)
	jam3	Junctional adhesion molecule 3a. (333 aa)
	ENSSPAP00000018988	Uncharacterized protein. (158 aa)
	fndc3a	Fibronectin type III domain containing 3A. (1241 aa)
	ENSSPAP00000017960	Ig-like domain-containing protein. (130 aa)
	ENSSPAP00000017874	Ig-like domain-containing protein. (119 aa)
	LOC103364060	Angiopoietin 2b. (504 aa)
	csmd2	CUB and Sushi multiple domains 2. (3089 aa)
	ENSSPAP00000017552	C-type lectin domain-containing protein. (165 aa)
	LOC103358536	CUB and Sushi multiple domains 3a. (3361 aa)
	LOC103364591	Syndecan; Cell surface proteoglycan; Belongs to the syndecan proteoglycan family. (291 aa)
	jam2	Junctional adhesion molecule 2a. (310 aa)
	pik3cb	Phosphatidylinositol-4,5-bisphosphate 3-kinase, catalytic subunit beta; Belongs to the PI3/PI4-kinase family. (1079 aa)
	ptpn11	Tyrosine-protein phosphatase non-receptor type; Belongs to the protein-tyrosine phosphatase family. Non- receptor class 2 subfamily. (602 aa)
	LOC103357892	Junctional adhesion molecule 3b. (302 aa)
	ENSSPAP00000015534	Sodium channel, voltage-gated, type II, beta. (211 aa)
	YES1	Tyrosine-protein kinase. (552 aa)
	LOC103375319	Platelet/endothelial cell adhesion molecule 1. (789 aa)
	pik3ca	Phosphatidylinositol 4,5-bisphosphate 3-kinase catalytic subunit. (1068 aa)
	LOC103366332	Integrin_alpha2 domain-containing protein; Belongs to the integrin alpha chain family. (1053 aa)
	LOC103372356	Tyrosine-protein kinase. (544 aa)
	cxadr	CXADR Ig-like cell adhesion molecule. (375 aa)
	ENSSPAP00000013725	IGv domain-containing protein. (119 aa)
	ENSSPAP00000013705	Uncharacterized protein. (228 aa)
	ENSSPAP00000013639	Ig-like domain-containing protein. (109 aa)
	LOC103361232	Uncharacterized protein. (237 aa)
	LOC103365062	Ig-like domain-containing protein. (352 aa)
	angpt1	Angiopoietin 1. (519 aa)
	kras	V-Ki-ras2 Kirsten rat sarcoma viral oncogene homolog. (189 aa)
	LOC103368533	Vitellogenin 3, phosvitinless. (1044 aa)
	LOC103374945	Zgc:55558. (187 aa)
	LOC103357838	Tyrosine-protein phosphatase non-receptor type; Belongs to the protein-tyrosine phosphatase family. Non- receptor class 2 subfamily. (593 aa)
	lck	Tyrosine-protein kinase. (500 aa)
	LOC103369071	CUB and Sushi multiple domains 1a. (262 aa)
	LOC103374397	Ig-like domain-containing protein. (287 aa)
	ENSSPAP00000026838	Protein kinase domain-containing protein. (75 aa)
	ENSSPAP00000026824	Protein kinase domain-containing protein. (77 aa)
	LOC103353777	Tyrosine-protein kinase. (538 aa)
	ENSSPAP00000026551	Ig-like domain-containing protein. (132 aa)
	ENSSPAP00000026497	Ig-like domain-containing protein. (218 aa)
	LOC103371787	Si:ch211-264f5.6. (573 aa)
	ENSSPAP00000026412	Uncharacterized protein. (280 aa)
	grb2	Growth factor receptor-bound protein 2b. (217 aa)
	ENSSPAP00000026020	Uncharacterized protein. (303 aa)
	ENSSPAP00000026003	Uncharacterized protein. (193 aa)
	ENSSPAP00000025987	Uncharacterized protein. (204 aa)
	LOC103365860	Integrin, alpha 5 (fibronectin receptor, alpha polypeptide); Belongs to the integrin alpha chain family. (1057 aa)
	LOC103375013	Uncharacterized protein. (334 aa)
	ENSSPAP00000025248	Uncharacterized protein. (251 aa)
	LOC103367061	Si:dkeyp-97a10.3. (958 aa)
	ENSSPAP00000024543	Uncharacterized protein. (429 aa)
	mif	Macrophage migration inhibitory factor. (115 aa)
	shc1	SHC (Src homology 2 domain containing) transforming protein 1. (434 aa)
	MPZL2	Myelin protein zero like 2. (255 aa)
	ENSSPAP00000023393	IG domain-containing protein. (170 aa)
	LOC103366539	VWFA domain-containing protein; Belongs to the integrin alpha chain family. (1204 aa)
	inpp5d	Inositol polyphosphate-5-phosphatase D. (1102 aa)
	ENSSPAP00000022515	Uncharacterized protein. (202 aa)
	ENSSPAP00000022497	Uncharacterized protein. (315 aa)
	ENSSPAP00000022061	Ig-like domain-containing protein. (357 aa)
	ENSSPAP00000021979	Si:dkey-237i9.8. (611 aa)
	ENSSPAP00000021862	C3H1-type domain-containing protein. (479 aa)
	LOC103366491	Integrin beta; Belongs to the integrin beta chain family. (783 aa)
	LOC103370719	Tyrosine kinase with immunoglobulin-like and EGF-like domains 1; Belongs to the protein kinase superfamily. Tyr protein kinase family. (413 aa)
	cd99l2	CD99 molecule-like 2. (246 aa)
	LOC103365935	Fibronectin 1a. (2478 aa)
	ENSSPAP00000030537	Vitellogenin domain-containing protein. (772 aa)
	angptl6	Angiopoietin-like 6. (491 aa)
	LOC103353268	Tumor necrosis factor receptor superfamily, member a. (448 aa)
	LOC103371520	Docking protein 2. (460 aa)
	LOC103364812	Endothelial cell adhesion molecule a. (425 aa)
	ENSSPAP00000029279	Uncharacterized protein. (317 aa)
	ENSSPAP00000029259	Uncharacterized protein. (106 aa)
	ENSSPAP00000028948	Ig-like domain-containing protein. (350 aa)
	LOC103353806	Uncharacterized protein. (416 aa)
	LOC103368817	D-dopachrome tautomerase. (118 aa)
	ENSSPAP00000000072	Uncharacterized protein. (400 aa)
	ENSSPAP00000000176	Uncharacterized protein. (278 aa)
	ENSSPAP00000000268	Uncharacterized protein. (319 aa)
	LOC103361570	Tyrosine-protein kinase. (547 aa)
	LOC103373890	Si:dkey-32n7.4; Belongs to the integrin alpha chain family. (1137 aa)
	CSDE1	Cold shock domain containing E1, RNA-binding. (912 aa)
	plcg1	1-phosphatidylinositol 4,5-bisphosphate phosphodiesterase gamma; Mediates the production of the second messenger molecules diacylglycerol (DAG) and inositol 1,4,5-trisphosphate (IP3). Plays an important role in the regulation of intracellular signaling cascades. (1313 aa)
	LOC103363269	Myelin protein zero-like 2b. (263 aa)
	ENSSPAP00000002651	Uncharacterized protein. (1629 aa)
	f11r	F11 receptor, tandem duplicate 1. (290 aa)
	ENSSPAP00000002686	Uncharacterized protein. (1608 aa)
	LOC103361614	Tyrosine-protein kinase. (537 aa)
	ENSSPAP00000002834	Ig-like domain-containing protein. (125 aa)
	ENSSPAP00000002911	Zgc:158659; Belongs to the PI3/PI4-kinase family. (508 aa)
	ENSSPAP00000002926	PI3K-ABD domain-containing protein; Belongs to the PI3/PI4-kinase family. (318 aa)
	fndc3b	Fibronectin type III domain containing 3Ba. (1211 aa)
	ENSSPAP00000002943	Ig-like domain-containing protein. (116 aa)
	lyn	Tyrosine-protein kinase. (511 aa)
	ENSSPAP00000003290	Uncharacterized protein. (130 aa)
	LOC103359773	Phosphatidylinositol 4,5-bisphosphate 3-kinase catalytic subunit. (1068 aa)
	ENSSPAP00000003540	Ig-like domain-containing protein. (123 aa)
	angptl7	Angiopoietin-like 7. (340 aa)
	LOC103364929	Integrin beta; Belongs to the integrin beta chain family. (795 aa)
	ENSSPAP00000004524	Ig-like domain-containing protein. (127 aa)
	LOC103364389	Growth factor receptor bound protein 7. (527 aa)
	ptpn6	Protein tyrosine phosphatase non-receptor type 6. (570 aa)

Your Current Organism:

Stegastes partitus

NCBI taxonomy Id: 144197
Other names: S. partitus, bicolor damselfish

Send network to Cytoscape

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
CSDE1	ENSSPAP00000000072	ENSSPAP00000001012	ENSSPAP00000000072	Cold shock domain containing E1, RNA-binding.	Uncharacterized protein.	0.514
CSDE1	ENSSPAP00000002911	ENSSPAP00000001012	ENSSPAP00000002911	Cold shock domain containing E1, RNA-binding.	Zgc:158659; Belongs to the PI3/PI4-kinase family.	0.704
CSDE1	ENSSPAP00000002926	ENSSPAP00000001012	ENSSPAP00000002926	Cold shock domain containing E1, RNA-binding.	PI3K-ABD domain-containing protein; Belongs to the PI3/PI4-kinase family.	0.704
CSDE1	ENSSPAP00000005980	ENSSPAP00000001012	ENSSPAP00000005980	Cold shock domain containing E1, RNA-binding.	Uncharacterized protein.	0.514
CSDE1	ENSSPAP00000006000	ENSSPAP00000001012	ENSSPAP00000006000	Cold shock domain containing E1, RNA-binding.	Uncharacterized protein.	0.514
CSDE1	ENSSPAP00000006047	ENSSPAP00000001012	ENSSPAP00000006047	Cold shock domain containing E1, RNA-binding.	SH2 domain-containing protein.	0.632
CSDE1	ENSSPAP00000006865	ENSSPAP00000001012	ENSSPAP00000006865	Cold shock domain containing E1, RNA-binding.	Uncharacterized protein.	0.570
CSDE1	ENSSPAP00000026412	ENSSPAP00000001012	ENSSPAP00000026412	Cold shock domain containing E1, RNA-binding.	Uncharacterized protein.	0.503
CSDE1	ENSSPAP00000026824	ENSSPAP00000001012	ENSSPAP00000026824	Cold shock domain containing E1, RNA-binding.	Protein kinase domain-containing protein.	0.632
CSDE1	ENSSPAP00000026838	ENSSPAP00000001012	ENSSPAP00000026838	Cold shock domain containing E1, RNA-binding.	Protein kinase domain-containing protein.	0.632
CSDE1	LOC103353777	ENSSPAP00000001012	ENSSPAP00000026813	Cold shock domain containing E1, RNA-binding.	Tyrosine-protein kinase.	0.632
CSDE1	LOC103357838	ENSSPAP00000001012	ENSSPAP00000012523	Cold shock domain containing E1, RNA-binding.	Tyrosine-protein phosphatase non-receptor type; Belongs to the protein-tyrosine phosphatase family. Non- receptor class 2 subfamily.	0.619
CSDE1	LOC103359773	ENSSPAP00000001012	ENSSPAP00000003379	Cold shock domain containing E1, RNA-binding.	Phosphatidylinositol 4,5-bisphosphate 3-kinase catalytic subunit.	0.704
CSDE1	LOC103361570	ENSSPAP00000001012	ENSSPAP00000000757	Cold shock domain containing E1, RNA-binding.	Tyrosine-protein kinase.	0.670
CSDE1	LOC103361614	ENSSPAP00000001012	ENSSPAP00000002823	Cold shock domain containing E1, RNA-binding.	Tyrosine-protein kinase.	0.670
CSDE1	LOC103363357	ENSSPAP00000001012	ENSSPAP00000005937	Cold shock domain containing E1, RNA-binding.	Uncharacterized protein.	0.514
CSDE1	LOC103364389	ENSSPAP00000001012	ENSSPAP00000004568	Cold shock domain containing E1, RNA-binding.	Growth factor receptor bound protein 7.	0.555
CSDE1	LOC103364929	ENSSPAP00000001012	ENSSPAP00000003970	Cold shock domain containing E1, RNA-binding.	Integrin beta; Belongs to the integrin beta chain family.	0.466
CSDE1	LOC103365935	ENSSPAP00000001012	ENSSPAP00000030793	Cold shock domain containing E1, RNA-binding.	Fibronectin 1a.	0.507
CSDE1	LOC103366491	ENSSPAP00000001012	ENSSPAP00000021080	Cold shock domain containing E1, RNA-binding.	Integrin beta; Belongs to the integrin beta chain family.	0.466