114 items (Stegastes partitus) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	ENSSPAP00000008854	Uncharacterized protein. (529 aa)
	LOC103361029	Uncharacterized protein. (301 aa)
	topors	Topoisomerase I binding, arginine/serine-rich a. (813 aa)
	ncoa1	Nuclear receptor coactivator 1. (1500 aa)
	sin3a	SIN3 transcription regulator family member Aa. (1273 aa)
	ENSSPAP00000001569	Uncharacterized protein. (309 aa)
	LOC103368295	Uncharacterized protein. (614 aa)
	LOC103368873	SIN3 transcription regulator family member Ab. (1298 aa)
	ENSSPAP00000003477	Uncharacterized protein. (406 aa)
	ENSSPAP00000003674	Uncharacterized protein. (285 aa)
	ing2	Inhibitor of growth protein. (281 aa)
	LOC103360002	DEAD (Asp-Glu-Ala-Asp) box helicase 5; Belongs to the DEAD box helicase family. (618 aa)
	uhrf1	Ubiquitin-like with PHD and ring finger domains 1. (777 aa)
	ENSSPAP00000005721	Uncharacterized protein. (449 aa)
	ENSSPAP00000005749	Uncharacterized protein. (305 aa)
	ENSSPAP00000005766	Uncharacterized protein. (427 aa)
	UHRF2	Ubiquitin like with PHD and ring finger domains 2. (920 aa)
	LOC103374620	Myocardin related transcription factor Ab. (1305 aa)
	ing1	Inhibitor of growth protein. (306 aa)
	LOC103353413	Uncharacterized protein. (610 aa)
	ENSSPAP00000007503	Uncharacterized protein. (545 aa)
	ENSSPAP00000008076	Uncharacterized protein. (459 aa)
	znf131	Zinc finger protein 131. (570 aa)
	ENSSPAP00000008968	Uncharacterized protein. (488 aa)
	ENSSPAP00000009465	Uncharacterized protein. (541 aa)
	ENSSPAP00000009595	Uncharacterized protein. (655 aa)
	ENSSPAP00000009716	Uncharacterized protein. (400 aa)
	ENSSPAP00000009840	Uncharacterized protein. (453 aa)
	park7	Parkinson protein 7. (189 aa)
	RING1	Ring finger protein 1. (417 aa)
	ENSSPAP00000010098	Uncharacterized protein. (225 aa)
	LOC103371831	Potassium channel tetramerization domain containing 2. (277 aa)
	LOC103355131	SP-RING-type domain-containing protein. (1091 aa)
	ENSSPAP00000012080	Chromo domain-containing protein. (120 aa)
	zmiz2	SP-RING-type domain-containing protein. (889 aa)
	ENSSPAP00000012499	Uncharacterized protein. (551 aa)
	ENSSPAP00000012634	Uncharacterized protein. (299 aa)
	LOC103370190	Ubiquitin-like domain-containing protein. (112 aa)
	casp8ap2	Uncharacterized protein. (1838 aa)
	cbx4	Chromo domain-containing protein. (143 aa)
	cbx8	Chromobox homolog 8b. (368 aa)
	LOC103361728	Chromobox homolog 4 (Pc class homolog, Drosophila). (566 aa)
	LOC103361729	Chromobox homolog 8a (Pc class homolog, Drosophila). (376 aa)
	LOC103371897	RAWUL domain-containing protein. (337 aa)
	e4f1	E4F transcription factor 1. (768 aa)
	SCML2	Scm polycomb group protein like 2. (656 aa)
	LOC103363949	Nucleophosmin 1b. (297 aa)
	ZBTB38	Uncharacterized protein. (908 aa)
	LOC103369617	Uncharacterized protein. (693 aa)
	ENSSPAP00000015294	Uncharacterized protein. (180 aa)
	LOC103369618	Uncharacterized protein. (464 aa)
	pias2	Protein inhibitor of activated STAT, 2. (538 aa)
	SCMH1	Scm polycomb group protein homolog 1. (723 aa)
	LOC103361810	Myocardin related transcription factor Aa. (1251 aa)
	ENSSPAP00000017195	Uncharacterized protein. (352 aa)
	LOC103358548	UBIQUITIN_CONJUGAT_2 domain-containing protein; Belongs to the ubiquitin-conjugating enzyme family. (158 aa)
	rnf2	Ring finger protein 2. (342 aa)
	LOC103367951	Uncharacterized protein. (657 aa)
	LOC103356847	Uncharacterized protein. (765 aa)
	ENSSPAP00000019384	Uncharacterized protein. (85 aa)
	ENSSPAP00000019465	Uncharacterized protein. (346 aa)
	LOC103374884	Uncharacterized protein. (797 aa)
	sumo2	Rad60-SLD domain-containing protein. (71 aa)
	DDX5	DEAD-box helicase 5; Belongs to the DEAD box helicase family. (635 aa)
	ENSSPAP00000019904	Uncharacterized protein. (819 aa)
	ENSSPAP00000019971	Uncharacterized protein. (207 aa)
	ENSSPAP00000019996	C2H2-type domain-containing protein. (132 aa)
	LOC103365207	Scaffold attachment factor B. (751 aa)
	ENSSPAP00000020952	Uncharacterized protein. (330 aa)
	ENSSPAP00000020967	Uncharacterized protein. (300 aa)
	pias4	Protein inhibitor of activated STAT, 4a. (507 aa)
	LOC103366963	Small ubiquitin-related modifier. (101 aa)
	ube2i	Ubiquitin-conjugating enzyme E2Ib; Belongs to the ubiquitin-conjugating enzyme family. (158 aa)
	ENSSPAP00000022578	Uncharacterized protein. (191 aa)
	ENSSPAP00000022605	Uncharacterized protein. (1152 aa)
	LOC103355946	DEAD-box helicase 17; Belongs to the DEAD box helicase family. (644 aa)
	LOC103364135	Uncharacterized protein. (464 aa)
	ENSSPAP00000023218	Chromobox homolog 2 (Drosophila Pc class). (484 aa)
	ep300	E1A binding protein p300 b. (2872 aa)
	LOC103365249	RING-type domain-containing protein. (1123 aa)
	LOC103375545	RING-type domain-containing protein. (330 aa)
	LOC103365254	Uncharacterized protein. (887 aa)
	LOC103356959	Scm polycomb group protein like 2. (700 aa)
	ENSSPAP00000024143	Uncharacterized protein. (151 aa)
	cfap53	Uncharacterized protein. (400 aa)
	ENSSPAP00000024173	Uncharacterized protein. (342 aa)
	LOC103368073	Zinc finger, MIZ-type containing 2. (746 aa)
	zmiz1	Zinc finger MIZ-type containing 1. (1089 aa)
	ENSSPAP00000025164	Rad60-SLD domain-containing protein. (149 aa)
	pias1	Protein inhibitor of activated STAT, 1a. (698 aa)
	ENSSPAP00000025720	Uncharacterized protein. (421 aa)
	ddx17	Uncharacterized protein; Belongs to the DEAD box helicase family. (406 aa)
	ENSSPAP00000027056	Uncharacterized protein. (724 aa)
	LOC103353782	Ubiquitin-like domain-containing protein. (131 aa)
	daxx	Death-domain associated protein. (733 aa)
	LOC103371470	RING-type domain-containing protein. (357 aa)
	ENSSPAP00000027557	Uncharacterized protein. (457 aa)
	LOC103372622	Uncharacterized protein. (750 aa)
	nrip1	Nuclear receptor interacting protein 1b. (1209 aa)
	ctbp1	C-terminal binding protein 1; Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family. (443 aa)
	mbd1	Methyl-CpG binding domain protein 1b. (828 aa)
	LOC103354886	Small ubiquitin-related modifier. (96 aa)
	LOC103363036	Nucleophosmin 1a. (248 aa)
	ENSSPAP00000029157	Uncharacterized protein. (570 aa)
	ENSSPAP00000029169	Uncharacterized protein. (569 aa)
	LOC103367686	Uncharacterized protein. (427 aa)
	ENSSPAP00000029567	Uncharacterized protein. (318 aa)
	ENSSPAP00000029568	Uncharacterized protein. (347 aa)
	ENSSPAP00000030423	Uncharacterized protein. (540 aa)
	ENSSPAP00000030485	Uncharacterized protein. (428 aa)
	LOC103371563	E1A binding protein p300 a. (2869 aa)
	ENSSPAP00000030516	Uncharacterized protein. (505 aa)
	LOC103372741	Protein inhibitor of activated STAT, 1b. (544 aa)
	ppargc1a	Peroxisome proliferator-activated receptor gamma, coactivator 1 alpha. (1275 aa)

Your Current Organism:

Stegastes partitus

NCBI taxonomy Id: 144197
Other names: S. partitus, bicolor damselfish

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structured XML interaction data, according to the 'PSI-MI' data standard

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node degree of proteins in your network (given the current score cut-off)

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a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

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MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

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a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
DDX5	ENSSPAP00000025164	ENSSPAP00000019838	ENSSPAP00000025164	DEAD-box helicase 5; Belongs to the DEAD box helicase family.	Rad60-SLD domain-containing protein.	0.562
DDX5	LOC103353782	ENSSPAP00000019838	ENSSPAP00000027383	DEAD-box helicase 5; Belongs to the DEAD box helicase family.	Ubiquitin-like domain-containing protein.	0.580
DDX5	LOC103354886	ENSSPAP00000019838	ENSSPAP00000028486	DEAD-box helicase 5; Belongs to the DEAD box helicase family.	Small ubiquitin-related modifier.	0.580
DDX5	LOC103358548	ENSSPAP00000019838	ENSSPAP00000017820	DEAD-box helicase 5; Belongs to the DEAD box helicase family.	UBIQUITIN_CONJUGAT_2 domain-containing protein; Belongs to the ubiquitin-conjugating enzyme family.	0.557
DDX5	LOC103360002	ENSSPAP00000019838	ENSSPAP00000005657	DEAD-box helicase 5; Belongs to the DEAD box helicase family.	DEAD (Asp-Glu-Ala-Asp) box helicase 5; Belongs to the DEAD box helicase family.	0.899
DDX5	LOC103366963	ENSSPAP00000019838	ENSSPAP00000021261	DEAD-box helicase 5; Belongs to the DEAD box helicase family.	Small ubiquitin-related modifier.	0.650
DDX5	LOC103370190	ENSSPAP00000019838	ENSSPAP00000012745	DEAD-box helicase 5; Belongs to the DEAD box helicase family.	Ubiquitin-like domain-containing protein.	0.580
DDX5	LOC103371563	ENSSPAP00000019838	ENSSPAP00000030493	DEAD-box helicase 5; Belongs to the DEAD box helicase family.	E1A binding protein p300 a.	0.687
DDX5	LOC103371831	ENSSPAP00000019838	ENSSPAP00000010517	DEAD-box helicase 5; Belongs to the DEAD box helicase family.	Potassium channel tetramerization domain containing 2.	0.557
DDX5	LOC103372741	ENSSPAP00000019838	ENSSPAP00000030747	DEAD-box helicase 5; Belongs to the DEAD box helicase family.	Protein inhibitor of activated STAT, 1b.	0.414
DDX5	ep300	ENSSPAP00000019838	ENSSPAP00000023258	DEAD-box helicase 5; Belongs to the DEAD box helicase family.	E1A binding protein p300 b.	0.687
DDX5	ncoa1	ENSSPAP00000019838	ENSSPAP00000001305	DEAD-box helicase 5; Belongs to the DEAD box helicase family.	Nuclear receptor coactivator 1.	0.408
DDX5	pias1	ENSSPAP00000019838	ENSSPAP00000025646	DEAD-box helicase 5; Belongs to the DEAD box helicase family.	Protein inhibitor of activated STAT, 1a.	0.414
DDX5	pias2	ENSSPAP00000019838	ENSSPAP00000015874	DEAD-box helicase 5; Belongs to the DEAD box helicase family.	Protein inhibitor of activated STAT, 2.	0.414
DDX5	sumo2	ENSSPAP00000019838	ENSSPAP00000019746	DEAD-box helicase 5; Belongs to the DEAD box helicase family.	Rad60-SLD domain-containing protein.	0.580
DDX5	ube2i	ENSSPAP00000019838	ENSSPAP00000021849	DEAD-box helicase 5; Belongs to the DEAD box helicase family.	Ubiquitin-conjugating enzyme E2Ib; Belongs to the ubiquitin-conjugating enzyme family.	0.557
ENSSPAP00000001569	ENSSPAP00000025164	ENSSPAP00000001569	ENSSPAP00000025164	Uncharacterized protein.	Rad60-SLD domain-containing protein.	0.445
ENSSPAP00000001569	LOC103353782	ENSSPAP00000001569	ENSSPAP00000027383	Uncharacterized protein.	Ubiquitin-like domain-containing protein.	0.445
ENSSPAP00000001569	LOC103354886	ENSSPAP00000001569	ENSSPAP00000028486	Uncharacterized protein.	Small ubiquitin-related modifier.	0.445
ENSSPAP00000001569	LOC103358548	ENSSPAP00000001569	ENSSPAP00000017820	Uncharacterized protein.	UBIQUITIN_CONJUGAT_2 domain-containing protein; Belongs to the ubiquitin-conjugating enzyme family.	0.479