15 items (Stegastes partitus) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	ube2i	Ubiquitin-conjugating enzyme E2Ib; Belongs to the ubiquitin-conjugating enzyme family. (158 aa)
	pias4	Protein inhibitor of activated STAT, 4a. (507 aa)
	LOC103372741	Protein inhibitor of activated STAT, 1b. (544 aa)
	nfkb2	Nuclear factor of kappa light polypeptide gene enhancer in B-cells 2 (p49/p100). (898 aa)
	LOC103354886	Small ubiquitin-related modifier. (96 aa)
	LOC103353782	Ubiquitin-like domain-containing protein. (131 aa)
	pias1	Protein inhibitor of activated STAT, 1a. (698 aa)
	topors	Topoisomerase I binding, arginine/serine-rich a. (813 aa)
	rela	V-rel avian reticuloendotheliosis viral oncogene homolog A. (634 aa)
	REL	REL proto-oncogene, NF-kB subunit. (639 aa)
	LOC103370190	Ubiquitin-like domain-containing protein. (112 aa)
	LOC103358548	UBIQUITIN_CONJUGAT_2 domain-containing protein; Belongs to the ubiquitin-conjugating enzyme family. (158 aa)
	sumo2	Rad60-SLD domain-containing protein. (71 aa)
	LOC103365249	RING-type domain-containing protein. (1123 aa)
	LOC103366963	Small ubiquitin-related modifier. (101 aa)

Your Current Organism:

Stegastes partitus

NCBI taxonomy Id: 144197
Other names: S. partitus, bicolor damselfish

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

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a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
LOC103353782	LOC103358548	ENSSPAP00000027383	ENSSPAP00000017820	Ubiquitin-like domain-containing protein.	UBIQUITIN_CONJUGAT_2 domain-containing protein; Belongs to the ubiquitin-conjugating enzyme family.	0.977
LOC103353782	LOC103365249	ENSSPAP00000027383	ENSSPAP00000023529	Ubiquitin-like domain-containing protein.	RING-type domain-containing protein.	0.673
LOC103353782	LOC103366963	ENSSPAP00000027383	ENSSPAP00000021261	Ubiquitin-like domain-containing protein.	Small ubiquitin-related modifier.	0.890
LOC103353782	LOC103372741	ENSSPAP00000027383	ENSSPAP00000030747	Ubiquitin-like domain-containing protein.	Protein inhibitor of activated STAT, 1b.	0.834
LOC103353782	REL	ENSSPAP00000027383	ENSSPAP00000011812	Ubiquitin-like domain-containing protein.	REL proto-oncogene, NF-kB subunit.	0.535
LOC103353782	pias1	ENSSPAP00000027383	ENSSPAP00000025646	Ubiquitin-like domain-containing protein.	Protein inhibitor of activated STAT, 1a.	0.834
LOC103353782	pias4	ENSSPAP00000027383	ENSSPAP00000021135	Ubiquitin-like domain-containing protein.	Protein inhibitor of activated STAT, 4a.	0.919
LOC103353782	rela	ENSSPAP00000027383	ENSSPAP00000009512	Ubiquitin-like domain-containing protein.	V-rel avian reticuloendotheliosis viral oncogene homolog A.	0.535
LOC103353782	topors	ENSSPAP00000027383	ENSSPAP00000000901	Ubiquitin-like domain-containing protein.	Topoisomerase I binding, arginine/serine-rich a.	0.673
LOC103353782	ube2i	ENSSPAP00000027383	ENSSPAP00000021849	Ubiquitin-like domain-containing protein.	Ubiquitin-conjugating enzyme E2Ib; Belongs to the ubiquitin-conjugating enzyme family.	0.977
LOC103354886	LOC103358548	ENSSPAP00000028486	ENSSPAP00000017820	Small ubiquitin-related modifier.	UBIQUITIN_CONJUGAT_2 domain-containing protein; Belongs to the ubiquitin-conjugating enzyme family.	0.973
LOC103354886	LOC103365249	ENSSPAP00000028486	ENSSPAP00000023529	Small ubiquitin-related modifier.	RING-type domain-containing protein.	0.673
LOC103354886	LOC103366963	ENSSPAP00000028486	ENSSPAP00000021261	Small ubiquitin-related modifier.	Small ubiquitin-related modifier.	0.888
LOC103354886	LOC103372741	ENSSPAP00000028486	ENSSPAP00000030747	Small ubiquitin-related modifier.	Protein inhibitor of activated STAT, 1b.	0.834
LOC103354886	REL	ENSSPAP00000028486	ENSSPAP00000011812	Small ubiquitin-related modifier.	REL proto-oncogene, NF-kB subunit.	0.535
LOC103354886	pias1	ENSSPAP00000028486	ENSSPAP00000025646	Small ubiquitin-related modifier.	Protein inhibitor of activated STAT, 1a.	0.834
LOC103354886	pias4	ENSSPAP00000028486	ENSSPAP00000021135	Small ubiquitin-related modifier.	Protein inhibitor of activated STAT, 4a.	0.919
LOC103354886	rela	ENSSPAP00000028486	ENSSPAP00000009512	Small ubiquitin-related modifier.	V-rel avian reticuloendotheliosis viral oncogene homolog A.	0.535
LOC103354886	topors	ENSSPAP00000028486	ENSSPAP00000000901	Small ubiquitin-related modifier.	Topoisomerase I binding, arginine/serine-rich a.	0.673
LOC103354886	ube2i	ENSSPAP00000028486	ENSSPAP00000021849	Small ubiquitin-related modifier.	Ubiquitin-conjugating enzyme E2Ib; Belongs to the ubiquitin-conjugating enzyme family.	0.973