STRINGSTRING
UBB UBB brca1 brca1 smarca5 smarca5 mre11 mre11 babam1 babam1 kdm4b kdm4b ENSSPAP00000005847 ENSSPAP00000005847 apbb1 apbb1 ENSSPAP00000009694 ENSSPAP00000009694 ENSSPAP00000026219 ENSSPAP00000026219 LOC103358109 LOC103358109 ENSSPAP00000025313 ENSSPAP00000025313 ankrd11 ankrd11 LOC103354764 LOC103354764 mdc1 mdc1 atm atm eya1 eya1 tp53 tp53 ube2i ube2i ENSSPAP00000021755 ENSSPAP00000021755 kat5 kat5 ENSSPAP00000021362 ENSSPAP00000021362 LOC103366963 LOC103366963 pias4 pias4 ENSSPAP00000020655 ENSSPAP00000020655 LOC103374328 LOC103374328 LOC103360134 LOC103360134 ube2v1 ube2v1 babam2 babam2 ENSSPAP00000017869 ENSSPAP00000017869 LOC103358548 LOC103358548 rad50 rad50 ENSSPAP00000015040 ENSSPAP00000015040 uba52 uba52 ENSSPAP00000014903 ENSSPAP00000014903 baz1b baz1b ube2n ube2n brcc3 brcc3 ENSSPAP00000012666 ENSSPAP00000012666 abraxas1 abraxas1 LOC103373487 LOC103373487 ENSSPAP00000010694 ENSSPAP00000010694 abl1 abl1 ENSSPAP00000030409 ENSSPAP00000030409 rps27a rps27a ppp5c ppp5c tp53bp1 tp53bp1 ENSSPAP00000029580 ENSSPAP00000029580 LOC103358166 LOC103358166 kxd1 kxd1 LOC103355465 LOC103355465 ENSSPAP00000001150 ENSSPAP00000001150 ENSSPAP00000002276 ENSSPAP00000002276 ENSSPAP00000002783 ENSSPAP00000002783 ENSSPAP00000003143 ENSSPAP00000003143 ENSSPAP00000003155 ENSSPAP00000003155
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
UBBUbiquitin B. (258 aa)
brca1Uncharacterized protein. (1411 aa)
smarca5SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 5. (1036 aa)
mre11Double-strand break repair protein; Involved in DNA double-strand break repair (DSBR). Possesses single-strand endonuclease activity and double-strand-specific 3'-5' exonuclease activity. Also involved in meiotic DSB processing. (698 aa)
babam1BRISC and BRCA1 A complex member 1. (378 aa)
kdm4bLysine (K)-specific demethylase 4B. (1064 aa)
ENSSPAP00000005847Histone H2B; Belongs to the histone H2B family. (117 aa)
apbb1Amyloid beta (A4) precursor protein-binding, family B, member 1 (Fe65). (685 aa)
ENSSPAP00000009694Histone H4; Core component of nucleosome. Nucleosomes wrap and compact DNA into chromatin, limiting DNA accessibility to the cellular machineries which require DNA as a template. Histones thereby play a central role in transcription regulation, DNA repair, DNA replication and chromosomal stability. DNA accessibility is regulated via a complex set of post-translational modifications of histones, also called histone code, and nucleosome remodeling. (99 aa)
ENSSPAP00000026219Ig-like domain-containing protein. (311 aa)
LOC103358109UBIQUITIN_CONJUGAT_2 domain-containing protein; Belongs to the ubiquitin-conjugating enzyme family. (152 aa)
ENSSPAP00000025313Histone H2B; Belongs to the histone H2B family. (116 aa)
ankrd11Ankyrin repeat domain 11. (2851 aa)
LOC103354764Uncharacterized protein. (495 aa)
mdc1Uncharacterized protein. (2005 aa)
atmNon-specific serine/threonine protein kinase. (3048 aa)
eya1Eyes absent homolog; Belongs to the HAD-like hydrolase superfamily. EYA family. (610 aa)
tp53Cellular tumor antigen p53; Acts as a tumor suppressor in many tumor types; induces growth arrest or apoptosis depending on the physiological circumstances and cell type. Involved in cell cycle regulation as a trans-activator that acts to negatively regulate cell division by controlling a set of genes required for this process. One of the activated genes is an inhibitor of cyclin-dependent kinases. Apoptosis induction seems to be mediated either by stimulation of BAX and FAS antigen expression, or by repression of Bcl-2 expression; Belongs to the p53 family. (381 aa)
ube2iUbiquitin-conjugating enzyme E2Ib; Belongs to the ubiquitin-conjugating enzyme family. (158 aa)
ENSSPAP00000021755FHA domain-containing protein. (91 aa)
kat5Histone acetyltransferase; Belongs to the MYST (SAS/MOZ) family. (560 aa)
ENSSPAP00000021362Ring finger protein 169. (548 aa)
LOC103366963Small ubiquitin-related modifier. (101 aa)
pias4Protein inhibitor of activated STAT, 4a. (507 aa)
ENSSPAP00000020655Ubiquitin-conjugating enzyme E2 variant 2. (145 aa)
LOC103374328Eyes absent homolog; Belongs to the HAD-like hydrolase superfamily. EYA family. (564 aa)
LOC103360134Eyes absent homolog; Belongs to the HAD-like hydrolase superfamily. EYA family. (563 aa)
ube2v1Ubiquitin-conjugating enzyme E2 variant 1. (149 aa)
babam2BRISC and BRCA1 A complex member 2. (332 aa)
ENSSPAP00000017869Reverse transcriptase domain-containing protein. (1440 aa)
LOC103358548UBIQUITIN_CONJUGAT_2 domain-containing protein; Belongs to the ubiquitin-conjugating enzyme family. (158 aa)
rad50RAD50 homolog, double strand break repair protein. (1382 aa)
ENSSPAP00000015040Histone domain-containing protein; Belongs to the histone H2B family. (135 aa)
uba52Ubiquitin A-52 residue ribosomal protein fusion product 1. (128 aa)
ENSSPAP00000014903Histone H2A; Belongs to the histone H2A family. (154 aa)
baz1bBromodomain adjacent to zinc finger domain, 1B. (1597 aa)
ube2nUbiquitin-conjugating enzyme E2Na; Belongs to the ubiquitin-conjugating enzyme family. (149 aa)
brcc3BRCA1/BRCA2-containing complex, subunit 3. (265 aa)
ENSSPAP00000012666Uncharacterized protein. (147 aa)
abraxas1Abraxas 1, BRCA1 A complex subunit. (340 aa)
LOC103373487Nuclear receptor binding SET domain protein 2. (1226 aa)
ENSSPAP00000010694Histone H4; Core component of nucleosome. Nucleosomes wrap and compact DNA into chromatin, limiting DNA accessibility to the cellular machineries which require DNA as a template. Histones thereby play a central role in transcription regulation, DNA repair, DNA replication and chromosomal stability. DNA accessibility is regulated via a complex set of post-translational modifications of histones, also called histone code, and nucleosome remodeling. (66 aa)
abl1Tyrosine-protein kinase. (1119 aa)
ENSSPAP00000030409Uncharacterized protein. (174 aa)
rps27aRibosomal protein S27a. (156 aa)
ppp5cSerine/threonine-protein phosphatase. (508 aa)
tp53bp1Tumor protein p53 binding protein, 1. (1561 aa)
ENSSPAP00000029580Uncharacterized protein. (482 aa)
LOC103358166Histone H2B; Belongs to the histone H2B family. (116 aa)
kxd1KxDL motif containing 1. (184 aa)
LOC103355465Eyes absent homolog; Belongs to the HAD-like hydrolase superfamily. EYA family. (476 aa)
ENSSPAP00000001150Histone H2B; Belongs to the histone H2B family. (130 aa)
ENSSPAP00000002276ANK_REP_REGION domain-containing protein. (438 aa)
ENSSPAP00000002783Uncharacterized protein; Core component of nucleosome. Nucleosomes wrap and compact DNA into chromatin, limiting DNA accessibility to the cellular machineries which require DNA as a template. Histones thereby play a central role in transcription regulation, DNA repair, DNA replication and chromosomal stability. DNA accessibility is regulated via a complex set of post-translational modifications of histones, also called histone code, and nucleosome remodeling. (97 aa)
ENSSPAP00000003143Uncharacterized protein. (100 aa)
ENSSPAP00000003155FHA domain-containing protein. (75 aa)
Your Current Organism:
Stegastes partitus
NCBI taxonomy Id: 144197
Other names: S. partitus, bicolor damselfish
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